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scnpilot_p_inoc_scaffold_352_84

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(84117..85856)

Top 3 Functional Annotations

Value Algorithm Source
type II secretory protein GspE n=1 Tax=Acidovorax radicis RepID=UPI0002377BE5 similarity UNIREF
DB: UNIREF100
  • Identity: 98.1
  • Coverage: 579.0
  • Bit_score: 1106
  • Evalue 0.0
  • rbh
type IV-A pilus assembly ATPase PilB Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.5
  • Coverage: 579.0
  • Bit_score: 1122
  • Evalue 0.0
type IV-A pilus assembly ATPase PilB similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 579.0
  • Bit_score: 1060
  • Evalue 0.0

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1740
ATGGCCGCTGTCGATACTGCCCCCAAAGAAGCCTCCGCAGTGGCCCTCCCCGGATTGGGCAGGGCCCTGATGTCTGCTGGCAAGCTGACCCAGAAGGCAGCAGAGGACATTTACAAAAAATCACAAACTAGCCGGACCAGCTTTATTGCCGAACTGACCGGTTCTGGCGCGGTGTCAGCTGCCGACTTGGCCCACACCGTGTCGGCTGTGTTTGGCGCACCCTTACTCGATCTGGATGCGATTGATCCGTTACGGCTTCCGAAAGAACTGCTCGACGGCAAGATATGCCAAGCATATCGGGTTGTTGTGCTCAGCAAACGGAATAATCGCCTGATTGTTGCGACGGCAGACCCTACTGACCAGGAAGCAGCCGAAAAAATAAAATTCACCACCCAGATGGGGGTGGACTGGATTATTGCGGAGTATGACAAGCTCAGCCGTCTGGTAGAAACCACCACCAAATCGGCCAGCGAATCTTTGGAAACACTGACGGGTGGTGGCGGTGATTTTGAATTTGACGACTCACCCATCGAAGAGGCGCCAGACAATAACGACGCCGGAGCTACTGATGTAGAAGATGCTCCCATCGTTAAATTCTTGCACAAAATGCTGCTGGACGCATTCAATATGCGTGCGTCGGATTTACATTTTGAACCTTATGAGCATCAGTACCGCGTGAGATTTCGGATTGATGGTGAATTGCGAGAAATCGCGTCCCCGCCAATAGCCATCAAGGACAAGCTGGCATCTCGCATCAAGGTGATTTCTCGCCTGGACATTTCTGAAAAGCGGGTACCGCAAGACGGGCGCATGAAACTTAAGGTGGGCCCGGACAGAGTTATTGATTTCCGGGTCAGTACCCTCCCGACCTTGTTTGGGGAAAAAATTGTTATCCGTATTCTGGACCCCAGCAGCGCCAAGCTGGGTATTGATGCATTGGGCTATGAACCCCAAGAGAAAGAGCGCCTGCTCGAAGCCATTGGGCGGCCCTATGGGATGATCTTGGTCACAGGCCCCACGGGCTCCGGTAAAACCGTTTCCCTTTATACCTGCTTGAACCTTCTCAACAAGCCAGGCGTCAATATTGCCACAGCGGAAGATCCATCCGAAATTAATCTTCCAGGCGTTAACCAAGTCAATGTGAATGAAAAGGCTGGACTAACCTTTGCGGTAGCCCTCAAGTCCTTTTTGCGGCAAGATCCCGACATTATCATGGTCGGTGAAATCCGTGATCTGGAAACTGCGGACATTTCCATCAAGGCAGCACAAACGGGGCATTTGGTGTTATCAACGCTTCACACCAATGATGCCCCCACTACTTTGACGCGCATGCGCAATATGGGGATCGCCCCGTTCAATATTGCTTCCAGCGTTATTCTCATCACAGCGCAGCGCTTGGCCCGCAGGTTGTGCCCCACTTGCAAAGCGCCGGCCGATATACCGCATGAATCGCTGCTCGAAGCAGGGTACAAAGAAGAAGAAATTGATGGAAGCTGGGTCACGTATCGCCCCGTAGGCTGCTCCGCTTGTAACAACGGATATAAGGGACGAGTCGGCATTTACCAAGTCATGCCGATCTCTGAGGACATCCAACGTATCATCCTGCGCGACGGGAGTGCACTAGAAATCGCCGAACAGGCGAGAGCAGAAGGCGTGCGCTCGCTTCGCGAATCCGGCCTGCACAAGGCAAGACTGGGCTTCACTTCACTGGAAGAAGTGCTTGCCGTCACCAACGAATAA
PROTEIN sequence
Length: 580
MAAVDTAPKEASAVALPGLGRALMSAGKLTQKAAEDIYKKSQTSRTSFIAELTGSGAVSAADLAHTVSAVFGAPLLDLDAIDPLRLPKELLDGKICQAYRVVVLSKRNNRLIVATADPTDQEAAEKIKFTTQMGVDWIIAEYDKLSRLVETTTKSASESLETLTGGGGDFEFDDSPIEEAPDNNDAGATDVEDAPIVKFLHKMLLDAFNMRASDLHFEPYEHQYRVRFRIDGELREIASPPIAIKDKLASRIKVISRLDISEKRVPQDGRMKLKVGPDRVIDFRVSTLPTLFGEKIVIRILDPSSAKLGIDALGYEPQEKERLLEAIGRPYGMILVTGPTGSGKTVSLYTCLNLLNKPGVNIATAEDPSEINLPGVNQVNVNEKAGLTFAVALKSFLRQDPDIIMVGEIRDLETADISIKAAQTGHLVLSTLHTNDAPTTLTRMRNMGIAPFNIASSVILITAQRLARRLCPTCKAPADIPHESLLEAGYKEEEIDGSWVTYRPVGCSACNNGYKGRVGIYQVMPISEDIQRIILRDGSALEIAEQARAEGVRSLRESGLHKARLGFTSLEEVLAVTNE*