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scnpilot_p_inoc_scaffold_390_7

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(8086..8913)

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein S4 n=1 Tax=Acidovorax radicis RepID=UPI00023770EA similarity UNIREF
DB: UNIREF100
  • Identity: 96.7
  • Coverage: 275.0
  • Bit_score: 539
  • Evalue 2.70e-150
  • rbh
pseudouridine synthase Rsu Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 275.0
  • Bit_score: 551
  • Evalue 5.70e-154
pseudouridine synthase Rsu similarity KEGG
DB: KEGG
  • Identity: 91.6
  • Coverage: 275.0
  • Bit_score: 511
  • Evalue 1.70e-142

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 828
ATGGTCAGCTCCCGCCTGAACAAGCGCATGGCCGAGCTGGGCCTGTGCTCGCGGCGCGAGGCGGACGACTGGATCGCCCAGGGCTGGGTCAAGGTCAATGGCCAGGTGGCCGAGATGGGCGTGCAGGTGTTGCCCACCGACCGCATCGACGTAGACAAGGTCGCCCAGGGTTTCCAGGAGCAGCGCGTCACCATCCTGCTGAACAAGCCCATCGGATATGTGAGCGGCCAGGCCGAGGATGGCCACACGCCTGCTGTGGCATTGATCAACCCCCGCACGCACTGGCGCGACGACCCCAGCCGCAACCGATTTTCACCGCCCCAACTGCGCGGCCTGGCGCCTGCGGGGCGGCTCGATATCGACTCGGTGGGCCTCTTGGTGCTGACCCAGGACGGCCGCGTGGCCCGGCAGATCATTGGTGAGGACTCCGAGATGGAAAAGGAGTACCTGGTGCGCGTCGTCTACCAGGCACCGGGTCAGGCGGTGCCACGCCATCCCAGTGAGCGCTCCGCGCCGCTGCAGGAGATTGACGAGCGCGATCCTGTCAGCACCAATGTGCAGGCGGTGTTTCCCCCCGCGTTGCTGGCCCGGCTGCGCCATGGCCTGAGCCTGGACGGCGAGCCGCTCAAGCCCGCCAAGGTCGATTGGCAAAACCCCGAGCAACTGCGCTTTGTGCTCACCGAAGGCAAGAAGCGCCAGATCCGCCGCATGTGCGAGCTGGTGGGTCTCAAGGTGGTGGGGCTCAAGCGCATTCGCATCGGCCGCGTCACTCTGGGCAATCTGCCGGTGGGGCAGTGGCGCTACCTGTCTCCCAGCGAGCGGTTCTGA
PROTEIN sequence
Length: 276
MVSSRLNKRMAELGLCSRREADDWIAQGWVKVNGQVAEMGVQVLPTDRIDVDKVAQGFQEQRVTILLNKPIGYVSGQAEDGHTPAVALINPRTHWRDDPSRNRFSPPQLRGLAPAGRLDIDSVGLLVLTQDGRVARQIIGEDSEMEKEYLVRVVYQAPGQAVPRHPSERSAPLQEIDERDPVSTNVQAVFPPALLARLRHGLSLDGEPLKPAKVDWQNPEQLRFVLTEGKKRQIRRMCELVGLKVVGLKRIRIGRVTLGNLPVGQWRYLSPSERF*