ggKbase home page
Advanced Search
Search Help

scnpilot_p_inoc_scaffold_390_141

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(161668..165903)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 99.8
  • Coverage: 999.99
  • Bit_score: 2742
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 97.7
  • Coverage: 999.99
  • Bit_score: 2689
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta'''' n=1 Tax=Acidovorax radicis RepID=UPI0002378015 similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 999.99
  • Bit_score: 2723
  • Evalue 0.0
  • rbh

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4236
ATGAAATCGCTACTCGACCTGTTCAAGCAATTCACGCCGGATGAGCATTTCGATGCCATCCGCATCGGCATGGCTTCGCCCGAAAAGATCCGTTCGTGGTCTTTCGGTGAGGTGAAGAAGCCCGAAACCATCAACTACCGCACGTTCAAGCCCGAGCGCGACGGCCTGTTCTGCGCCAAGATTTTTGGTCCCATCAAGGACTACGAATGCTTGTGCGGCAAGTACAAGCGCCTCAAGCACCGCGGTGTGATCTGCGAGAAGTGCGGCGTGGAAGTCACGCAGACTAAGGTGCGCCGCGAGCGCATGGGCCACATCGACCTGGCCGCGCCTTGCGCCCACATCTGGTTCCTGAAGTCGCTGCCATCGCGTCTGGGCCTGGTGCTGGACATGACGCTGCGCGACATCGAACGCGTGCTGTACTTTGAAGCCTACGTAGTGACCGACCCCGGCATGACCCCGCTGAAGAAGTTCAGCATCATGTCCGAGGACGACTACGACGCCAAGCGCAAGGAATACGGCGACGAGTTCGTGGCCAAGATGGGCGCGGAAGGTATCAAGGACCTGCTGGAATCGATCGACATCGACCTGTCGATCGAGCGCCTGCGTGGCGACCTGACCGGCTCCGAAGTCAAGGTCAAGAAGAACGCCAAGCGCCTGAAGGTGCTGGAAGCGTTCAAGAAGTCGGGCATCAAGCCCGAGTGGATGGTGCTCGAAGTGCTGCCCGTGCTGCCCCCGGACCTGCGTCCGCTGGTGCCGCTGGACGGCGGCCGCTTTGCGACCTCCGACCTGAACGACCTGTACCGCCGCGTTATCAACCGCAACTCGCGTCTGCGCCGCCTGCTGGAGCTGAAGGCCCCTGAAATCATCGCCCGCAACGAAAAGCGGATGCTGCAGGAAGCGGTTGACTCGCTGCTGGACAACGGCCGCCGTGGCAAGGCTATGACGGGCGCCAACAAGCGTGCTCTGAAGTCGCTGGCCGACATGATCAAGGGCAAGTCCGGCCGTTTCCGCCAGAACTTGCTGGGCAAGCGCGTGGACTACTCCGGTCGTTCCGTGATTACCGTGGGCCCAACGCTCAAGCTGCACCAGTGCGGTCTGCCCAAGCTGATGGCGCTGGAGCTGTTCAAGCCTTTCATCTTCTCGCGCCTCGAAGCCATGGGCATCGCGACGACGATCAAGGCCGCCAAGAAGGAAGTCGAATCCGGCACCCCCGTGGTGTGGGACATTCTGGAGGAGGTGATCAAAGAGCACCCCGTGATGCTGAACCGTGCGCCTACGCTGCACCGTTTGGGTATCCAGGCCTTTGAGCCCATCCTGATCGAAGGCAAGGCCATCCAGCTGCACCCCCTCGTTTGCGCGGCCTTCAACGCCGACTTCGACGGTGACCAGATGGCTGTCCACGTCCCGCTGTCGGTGGAAGCGCAGATGGAAGCCCGCACGCTGATGCTGGCCTCCAACAACGTGCTGTTCCCTGCGTCGGGCGAACCCTCCATCGTTCCTTCGCAGGACGTGGTGCTGGGCTTGTACTACGCCACCCGCGATCGCATCAACGGCAAGGGTGAAGGCCTGGTGTTTGCCGATACCGGTGAAGTGCAGCGTGCTCTGGACGCTGGCGAGGTCGAACTGGCCGCCAAGATCACGGTGCGCATGACCGAGTGGACCAAGAACAAGGAAACGGGCGAATTCATTCCGTCCACCTCGCTCGTGGAAACCACGGCCGGCCGTGCGCTGCTGTCCGAGATTCTTCCCAAGGGCCTGCCGTTCTCCAACATGAACAAGGCGCTCAAGAAGAAGGAAATCTCGCGCCTGATCAACGTCTCGTTCCGCAAGTGCGGTCTGAAGGAAACGGTCGTGTTCGCCGACAAGCTGCTGCAGAACGGCTTCCGTCTGGCCACGCGCGCCGGCATCTCGATCGCCATTGATGACATGCTGGTGCCGCCCCAAAAGGCCGGCATCATCGAGCGCTCCGAGAAGGAAGTCAAAGAGATCGAACAGCAGTATGTGTCCGGTCTGGTCACCTCTGGCGAGCGCTACAACAAGGTGGTGGACATCTGGGGCAAGGCCGGCGACGAAGTGTCCAAGGTGATGATGGCCCAGCTGTCCAAGCAGAAGGTCATGGACCGCCACGGCAAGGAAGTGGACCAGGAGTCCTTCAACTCCATCTACATGATGGCCGACTCTGGCGCTCGCGGTTCCGCAGCCCAGATTCGTCAGGTGGCCGGTATGCGGGGTCTGATGGCCAAGCCAGATGGCTCGATCATCGAAACGCCTATCACCGCGAACTTCCGCGAAGGTCTGAACGTGCTGGAGTACTTCATCTCCACCCACGGTGCCCGTAAGGGTCTGGCCGACACGGCGCTGAAGACCGCCAACTCCGGTTACCTCACCCGCCGTCTGGTGGACGTGACGCAGGATCTGGTCGTGACCGAAGAGGATTGCGGCACGTCCAATGGTTCGCTGATGCGCGCCATCGTTGAAGGCGGTGAAGTGATCGAATCGCTGCGCGACCGTATCCTGGGCCGCACGGCGGCGGAAGACGTTCTGCACCCCGAGAACCGCTCGGTGCTGGTCTCAGCGGGTGTCATGCTCGACGAAGACCTCATCGAAGAACTTGAAGCGGCTGGCGTGGACGAAGTGAAGGTTCGCACGGCACTGACCTGCGAAACCCGCTACGGCCTGTGCGCCAAGTGCTACGGCCGCGACTTGGGCCGTGGCGGCCTGATCAACCTCGGCGAAGCCGTGGGTGTGATTGCTGCTCAGTCCATCGGTGAACCCGGCACGCAGCTGACCATGCGCACGTTCCACATCGGTGGTGCCGCATCGCGCGCTGCCATCGCATCGAGCGTGGAAGCCAAGTCCAACGGCGTGATCGGCTTCAACGCCACGATGCGCTACGTGAGCAACACCAAGGGTGAGCTGGTGGTGATTGCGCGTTCGGGTGAAATCATCATCCACGACGAGCATGGCCGCGAGCGCGAACGCCACAAGGTGCCTTACGGTGCAACGCTGACGGTGAAGGCCGACCAGACCATCAAGGCTGGCACTATCCTCGCCAACTGGGATCCGCTGACGCGCCCCATCATCACCGAGTTCGCCGGTCAGACCAAGTTCGAGAACGTCGAAGAAGGTCTCACGGTGGCCAAGCAGGTCGACGAAGTGACCGGCCTGTCCACGCTGGTGGTGATCGATCCGAAGCGCCGTGGCGCTGCCAAGGTCGTTCGCCCGCAGGTGAAGCTGATCGACGCCCAGGGCAACGAAGTGAAGATCCCTGGCACCGACCACTCGGTGACCATCGGCTTCCAGGTGGGCGCTCTGATTCAGGTGCGCGACGGCCAGGACGTGGGCCCCGGCGAAGTGCTGGCGCGTATTCCGGTCGAAGGTCAGAAGACCCGCGACATTACCGGCGGTCTGCCCCGTGTGGCCGAGCTGTTCGAAGCCCGTACGCCGAAGGACAAGGGCACGCTGGCCGAGATGACCGGTACCGTGTCGTTCGGCAAGGAAACCAAGGGCAAGGTCCGCTTGCAGATCACTGATCCTGAAGGCCATGTGTTCGAAGAACTCGTGCCCAAGGAAAAGAACATCCTGGTGCACGAAGGCCAGGTGGTGAACAAGGGCGAATCGATTGTGGACGGCCCGGCCGACCCACAAGACATCCTGCGTTTGCTGGGTATCGAAGAGCTGTCGCGCTACATCGTTGATGAAGTGCAGGATGTGTACCGCTTGCAGGGTGTGAAGATCAACGACAAGCACATCGAGGTGATCGTTCGCCAGATGCTGCGCCGTGTCGTGGTCGAGAACGTTGGCGAGTCCAACTACATCGCCGGTGAACAGATCGAGCGTTCCGAGATCCTCAACACCAACGATGCGTTGCAGGCCGAAGGCAAGATCCCCGCGACCTACAGCAACCTGCTGCTGGGTATCACCAAGGCTTCGCTGTCGACCGACTCGTTCATCTCGGCCGCTTCCTTCCAGGAAACGACCCGCGTGCTCACCGAGGCTGCCATCATGGGCAAGCGCGACGAGCTGCGTGGCCTGAAGGAAAACGTGATCGTGGGTCGTCTGATCCCGGCCGGTACCGGCATGGCCTACCACCAGGCACGCAAGGCCAAGGACGCCATGGACGACGCCGAGCGCCGCGCCATTGCTGAAGCCGAAGCCGCCGAGATGGAAGCCCAGGGTGAAGCAACGGAAGTCGAGGGCAGCACCTCCACCGCGACCGACGCAGCCGCTGACTAA
PROTEIN sequence
Length: 1412
MKSLLDLFKQFTPDEHFDAIRIGMASPEKIRSWSFGEVKKPETINYRTFKPERDGLFCAKIFGPIKDYECLCGKYKRLKHRGVICEKCGVEVTQTKVRRERMGHIDLAAPCAHIWFLKSLPSRLGLVLDMTLRDIERVLYFEAYVVTDPGMTPLKKFSIMSEDDYDAKRKEYGDEFVAKMGAEGIKDLLESIDIDLSIERLRGDLTGSEVKVKKNAKRLKVLEAFKKSGIKPEWMVLEVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNSRLRRLLELKAPEIIARNEKRMLQEAVDSLLDNGRRGKAMTGANKRALKSLADMIKGKSGRFRQNLLGKRVDYSGRSVITVGPTLKLHQCGLPKLMALELFKPFIFSRLEAMGIATTIKAAKKEVESGTPVVWDILEEVIKEHPVMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSVEAQMEARTLMLASNNVLFPASGEPSIVPSQDVVLGLYYATRDRINGKGEGLVFADTGEVQRALDAGEVELAAKITVRMTEWTKNKETGEFIPSTSLVETTAGRALLSEILPKGLPFSNMNKALKKKEISRLINVSFRKCGLKETVVFADKLLQNGFRLATRAGISIAIDDMLVPPQKAGIIERSEKEVKEIEQQYVSGLVTSGERYNKVVDIWGKAGDEVSKVMMAQLSKQKVMDRHGKEVDQESFNSIYMMADSGARGSAAQIRQVAGMRGLMAKPDGSIIETPITANFREGLNVLEYFISTHGARKGLADTALKTANSGYLTRRLVDVTQDLVVTEEDCGTSNGSLMRAIVEGGEVIESLRDRILGRTAAEDVLHPENRSVLVSAGVMLDEDLIEELEAAGVDEVKVRTALTCETRYGLCAKCYGRDLGRGGLINLGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAIASSVEAKSNGVIGFNATMRYVSNTKGELVVIARSGEIIIHDEHGRERERHKVPYGATLTVKADQTIKAGTILANWDPLTRPIITEFAGQTKFENVEEGLTVAKQVDEVTGLSTLVVIDPKRRGAAKVVRPQVKLIDAQGNEVKIPGTDHSVTIGFQVGALIQVRDGQDVGPGEVLARIPVEGQKTRDITGGLPRVAELFEARTPKDKGTLAEMTGTVSFGKETKGKVRLQITDPEGHVFEELVPKEKNILVHEGQVVNKGESIVDGPADPQDILRLLGIEELSRYIVDEVQDVYRLQGVKINDKHIEVIVRQMLRRVVVENVGESNYIAGEQIERSEILNTNDALQAEGKIPATYSNLLLGITKASLSTDSFISAASFQETTRVLTEAAIMGKRDELRGLKENVIVGRLIPAGTGMAYHQARKAKDAMDDAERRAIAEAEAAEMEAQGEATEVEGSTSTATDAAAD*