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scnpilot_p_inoc_scaffold_519_22

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(20830..21396)

Top 3 Functional Annotations

Value Algorithm Source
ECF subfamily RNA polymerase sigma-24 factor n=1 Tax=Acidovorax sp. KKS102 RepID=K0HZA3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 98.9
  • Coverage: 188.0
  • Bit_score: 377
  • Evalue 7.20e-102
  • rbh
ECF subfamily RNA polymerase sigma-24 factor Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 188.0
  • Bit_score: 382
  • Evalue 3.10e-103
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 98.4
  • Coverage: 188.0
  • Bit_score: 376
  • Evalue 5.90e-102

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGCCCGACACCCCTGGCGATTTTGACTACGAAGCCGCTCTGGCCGCCTGCGCAGCGGGCGACCGGCAGGCCATGCACCGCCTGTACCAACAGGAGGGCGCGCGGCTACTGGGCGTTGCGCTGCGCATCGTGCGCCAGCGGGCCCTGGCCGAGGACATCGTGCACGATGCCTGCGTGAACATCTGGACCCGCGCCGCCAGCTACGACCCGCGCCGGGGCAGCGCACGCGGCTGGATCTACAGCGTGGTGCGCAACCTGGCCCTGAACGCCGTTCGCGACGCGGGCCGCCACGTTGATGTGGACGACACCACCACCCAAGCCCTGGAGGCCGACATGTCTGTGCAGGCCCACCATGAGGTCGAGGAAACCTTTGCGCTGAACGCCAGCCTGGGCCGCCTGCAGCATTGCCTGGAGGCCCTGGACCCCGCGCGCCGCAACTGCGTGCTGCACGCCTATGTGGACGGCTGCTCGCACGGAGAAATTGCGGAGCGCCTCGGTGCGCCGCTGGGCACCGTCAAGGCGTGGATCCGGCGCAGCCTGGTTTCGCTGCGGGAGTGCATGGCATGA
PROTEIN sequence
Length: 189
VPDTPGDFDYEAALAACAAGDRQAMHRLYQQEGARLLGVALRIVRQRALAEDIVHDACVNIWTRAASYDPRRGSARGWIYSVVRNLALNAVRDAGRHVDVDDTTTQALEADMSVQAHHEVEETFALNASLGRLQHCLEALDPARRNCVLHAYVDGCSHGEIAERLGAPLGTVKAWIRRSLVSLRECMA*