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scnpilot_p_inoc_scaffold_574_48

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 52468..53157

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Acidovorax radicis RepID=UPI00023777A7 similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 228.0
  • Bit_score: 427
  • Evalue 9.70e-117
  • rbh
colD-shock DNA-binding domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.3
  • Coverage: 229.0
  • Bit_score: 477
  • Evalue 8.70e-132
colD-shock DNA-binding domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 77.7
  • Coverage: 233.0
  • Bit_score: 380
  • Evalue 3.80e-103

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGCAGAAACAAGGCACCGTCATCCGCTGGGACGCTACCCGCGCCTTCGGCTTCATCCGCAGCCCGGACACGTCCGCCGATGTGTTCTTTCATGTGCGGGACTACCGGGGCACCACCCCGCCGCGCGAAGGGATCGCCGTGGTGTACGAGGAAATTCATGTCGGCGGAAAAGGACCACGGGCCATGGCAGTGCTGCCTGCGGCCCAGCAAGGGGGCGCATCCCCGTCCCGCCCAGCGGCCACATCAACCCCTCAGCGGAGACGACACGAACCGTCGCAGCGGACGACCCAACCCCAGGCTCAACGCCGCCGACGCCCTGCAGAGTCCAGTGGCCCGCCCACCCCCGCCGGTCCGGCGATGGTGTTGATGCTGGGCTGGGTGGTGCTGCTGGCATGGGGCTTCTGGGCGGGCCGACTCCCATGGTGGGTGTTGGGGGCGGCCCTGGCCGTCAATCTCCTCACGTTTCTGGTCTATGCCATCGACAAAAGCGCCGCGCAAAACGGCCAGTGGCGCACCAAAGAGAGCCATCTGCACCTGCTGAGCCTGGCAGGCGGCTGGCCGGGTGCTTGGTTTGCGCAGCAATGGCTGCGGCACAAATCCCGCAAGGTGGAGTTTCGCGCCGTCTACTGGGTCACCGTGGTGCTGCATTGCGGGGCGCTCGGGGCCTGGGTGGGCGGGTGGCTGCCATAG
PROTEIN sequence
Length: 230
MQKQGTVIRWDATRAFGFIRSPDTSADVFFHVRDYRGTTPPREGIAVVYEEIHVGGKGPRAMAVLPAAQQGGASPSRPAATSTPQRRRHEPSQRTTQPQAQRRRRPAESSGPPTPAGPAMVLMLGWVVLLAWGFWAGRLPWWVLGAALAVNLLTFLVYAIDKSAAQNGQWRTKESHLHLLSLAGGWPGAWFAQQWLRHKSRKVEFRAVYWVTVVLHCGALGAWVGGWLP*