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scnpilot_p_inoc_scaffold_1002_10

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: comp(9742..11331)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 factor n=1 Tax=Acidovorax sp. NO-1 RepID=H0C2R4_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 96.2
  • Coverage: 532.0
  • Bit_score: 999
  • Evalue 1.40e-288
  • rbh
RNA polymerase sigma-54 subunit RpoN Tax=GWA2_Burkholderiales_64_37_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 529.0
  • Bit_score: 1033
  • Evalue 0.0
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 93.1
  • Coverage: 533.0
  • Bit_score: 968
  • Evalue 5.80e-280

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Taxonomy

GWA2_Burkholderiales_64_37_curated → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1590
ATGAAGCCTGGACTGTCGCTGCGCGTCTCGCAGCATCTTGCACTGACCCCCCAGCTTCAGCAGTCCATTCGGCTGCTGCAGTTGTCCACGCTCGAACTCTCGCAGGAAGTCGAGCAGATGCTCGACGAAAACCCGTTCCTCGAACGCAATGCCGACGAAGCTCCGCGCGAGGAGTTTGGCCTGGAAGCCGCCGACACGCCCGCGCAGCCCGATGAGTACAGCGCCGATGATGCTATATTTTCAGGAGCTAGCAGCGCAAGCAGCACAAGCGCTGAAGGCCAAAATGATGCTGAAACGCCGAGTGCTGGCGCTGACGAGCCTGACTGGAGCGGTGACGGCACGGTAGAAATGGCGCCCAACGACGCGGAGTGGGGCGGGGATGCGCCCGCCCGCAACCGCAACGACTCCGAAGGCGACGAGGCCGACGCCACCGAGCTTGCCCGTTCGCATGAATCGCTGACCGCCTTTTTGCACCGTCAGGCACTGGCGCTGCGCTTGTCAGAGATTGACCGCGCAGCGCTGCGTTTTCTCATTGAATCGCTCAACGACGACGGCTACCTCGAAGAGCCGCTGGAAGAGCTGGCCATCAGCCTGGCCGGGCCGGACGACCTGGAGCAGATTGAAGAGCTGGTGCACCGCTTCACCGTGGCCCAGCGCCTGCTGCAAAGCCTGGAGCCCACCGGCGTGGGTGCGCGCAACCTGGCCGAATGCCTGACGCTGCAGCTCACGGCGCTGGCTGCCGACGAGGACAGCGATGCTGACCCCGACACGGTGCAGACCGCGCTGCGCATTTGTCAGCAGCCGCTGGAGATGCTGGCCCGCCGCGACATCCGCCGCCTGACGCAGCTGTGTGGCGACGGCGAAGAGCGCACCCGCGCCGCCATGGCGCTGATTGCTCGCCTGGAGCCCCGCCCTGGCCGTCGCTTTGCCGATGTGGAGCGCAACATCATCATTCCCGATGTCATCGTGCGCAAAGCCGGGCGCGCCAATGGACGCGACGGCCAGCACAACTTCATCGTCAGCCTCAACCCTGATGTGATGCCGCGCCTGCGCGTGCACGACATTTATGCTGGCGCCCTGCGCGGCCACAAGGGCGGCGAGGGCCACCAGGGCATGCAGCAGCGCCTGCAGGAGGCGCGCTGGTTCATCAAGAACATCCAGCAGCGCTTTGATACCATCCTGCGCGTCTCGCGCGCCATCGTGGAGCGGCAAAAAAGCTTCTTCACCCACGGCGAGTTGGCCATGCGCCCGCTGGTGCTGCGCGACATCGCCGACGAACTGGGCCTGCACGAATCCACCATCAGCCGCGTGACCACCGCCAAATACATGGCCACGCCAATTGGCACGTATGAGCTGAAGTACTTCTTTGGCTCGGGCCTGGGTACCGAGACCGGCGGCAACGCGTCCAGCACCGCCGTGCGCGCCCTCATCAAGCAGTTTGTGGCCGCAGAAAGCCCCGCCAAGCCGCTGTCCGACAGCCAGATCGCCGAGATGCTCAAGGAGCAGGGCATCGAGTGCGCACGCCGCACCGTGGCCAAGTACCGCGAGGCGCTCAAGATCGCGCCGGCCAACCTGCGCAAGGCGCTGTAG
PROTEIN sequence
Length: 530
MKPGLSLRVSQHLALTPQLQQSIRLLQLSTLELSQEVEQMLDENPFLERNADEAPREEFGLEAADTPAQPDEYSADDAIFSGASSASSTSAEGQNDAETPSAGADEPDWSGDGTVEMAPNDAEWGGDAPARNRNDSEGDEADATELARSHESLTAFLHRQALALRLSEIDRAALRFLIESLNDDGYLEEPLEELAISLAGPDDLEQIEELVHRFTVAQRLLQSLEPTGVGARNLAECLTLQLTALAADEDSDADPDTVQTALRICQQPLEMLARRDIRRLTQLCGDGEERTRAAMALIARLEPRPGRRFADVERNIIIPDVIVRKAGRANGRDGQHNFIVSLNPDVMPRLRVHDIYAGALRGHKGGEGHQGMQQRLQEARWFIKNIQQRFDTILRVSRAIVERQKSFFTHGELAMRPLVLRDIADELGLHESTISRVTTAKYMATPIGTYELKYFFGSGLGTETGGNASSTAVRALIKQFVAAESPAKPLSDSQIAEMLKEQGIECARRTVAKYREALKIAPANLRKAL*