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scnpilot_p_inoc_scaffold_1532_36

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 35825..36391

Top 3 Functional Annotations

Value Algorithm Source
Collagen triple helix repeat-containing protein n=1 Tax=Acidovorax radicis RepID=UPI00023774A0 similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 193.0
  • Bit_score: 236
  • Evalue 2.00e-59
collagen triple helix repeat-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 84.2
  • Coverage: 190.0
  • Bit_score: 317
  • Evalue 9.50e-84
collagen triple helix repeat-containing protein similarity KEGG
DB: KEGG
  • Identity: 56.3
  • Coverage: 199.0
  • Bit_score: 198
  • Evalue 2.20e-48

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
ATGAAGTCATCTTTTCATCCTCTGCGTCTGATCTGCGCCCTGAGCGCTGTCTATGCACTGCACACGCCCCTGGCCCTGGCTGCAGATCTCAGCTTCACCCCGCCCAGCGGCGGCGGTTTTGTGATCAAGAGCCCGGGCGGTGCCCAGGAACGGTTTCGTGTGCAGGGCACTGGCGAGGTCACTGTCCCCGGCCTGAACGGTGCCCCCACCGCCAACAACCTCACCTGCTTTGATGGCGCAGGGCGCCTGGGGCCTTGTGCGGCAGGTATTGGCTCTGGCGCCACGGGTGCCACAGGCCCCACCGGGGCGACCGGTGCAACAGGCGTGACCGGCCCCACCGGTGTCACAGGTACCACAGGTACTACCGGTGTTACTGGCGCCACTGGTCCGACAGGTGCCACTGGAGCGACCGGCGCTTCGGGCACCGGTGCCACGGGCGCAACAGGCGCCACCGGGGCCACGGGCGCTACCGGTGTGACGGGCCCGGGCCAACCGGGACCACCGGCGCAACGGGTGCCACAGGGCCAACCGGCGCTACGGGCGCCACAGGGGTTGCTGGACCATTGA
PROTEIN sequence
Length: 189
MKSSFHPLRLICALSAVYALHTPLALAADLSFTPPSGGGFVIKSPGGAQERFRVQGTGEVTVPGLNGAPTANNLTCFDGAGRLGPCAAGIGSGATGATGPTGATGATGVTGPTGVTGTTGTTGVTGATGPTGATGATGASGTGATGATGATGATGATGVTGPGQPGPPAQRVPQGQPALRAPQGLLDH*