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scnpilot_p_inoc_scaffold_2254_11

Organism: SCNpilot_P_inoc_Acidovorax_64_34

near complete RP 51 / 55 MC: 1 BSCG 50 / 51 MC: 1 ASCG 14 / 38
Location: 12077..12736

Top 3 Functional Annotations

Value Algorithm Source
TetR family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002378396 similarity UNIREF
DB: UNIREF100
  • Identity: 88.1
  • Coverage: 218.0
  • Bit_score: 372
  • Evalue 3.50e-100
  • rbh
TetR family transcriptional regulator Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 98.2
  • Coverage: 219.0
  • Bit_score: 421
  • Evalue 5.40e-115
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 84.2
  • Coverage: 209.0
  • Bit_score: 342
  • Evalue 6.50e-92

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Taxonomy

R_Burkholderiales_64_960 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 660
ATGGCGCGTCGAACCAAGGAAGATGCGGTTGCCACGCGCAACGGCTTGATTGATGCGGCGGAGCAGGTTTTTCGGGAGAAGGGCGTCTCACGCGCTTCGCTGAGTGATATTGCGCAGGCTGCGGGGGCTACGCGGGGAGCGATCTACTGGCACTTCAAGGACAAGGTGGATCTTTTCAATGCCATGATGGATCGGGTGACACTTCCGCTGGAGCAAGGCTACGGGGAGTTTGAGAGCAGCACCTGTCCAGACCCTGTGCAGCGATTGCGCGCGGTGATGGCGCTTGTGCTGCGCGGCGTTGCCTCTGATGAGCGAACGCGCAGGGTTTTTGAGATCGCGCTCTACAAAGTAGAGTATGTGAGCGAGCTTGTGGGGGTGCGTGACCGCCATGTGGCTGCGTCGGAGGGTTTTACGCAGCAGCTGGCGCGTGATTTCGCGTTGGGGGCGCAGCACCAGGGGGTTGTCTTGCCGATGGCTCCGATCGAGGCGGCGATTGGTTTGCATGCCCTGTTCGATGGCTTGATTCGAAACTGGATCCTGACCGAGGGTAATTTTGATCTTGTGGGTGTTGGTGGTGCCTGTACCGATGCCTTTTTGTTGGGGCTGGGGCTCTCGCTGCCGGTGTCCTTGGGCGCCGAGGTTTGTAGTCTTTCTTCTTGA
PROTEIN sequence
Length: 220
MARRTKEDAVATRNGLIDAAEQVFREKGVSRASLSDIAQAAGATRGAIYWHFKDKVDLFNAMMDRVTLPLEQGYGEFESSTCPDPVQRLRAVMALVLRGVASDERTRRVFEIALYKVEYVSELVGVRDRHVAASEGFTQQLARDFALGAQHQGVVLPMAPIEAAIGLHALFDGLIRNWILTEGNFDLVGVGGACTDAFLLGLGLSLPVSLGAEVCSLSS*