ggKbase home page

scnpilot_p_inoc_scaffold_3399

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3399_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

218..1228
-----------------
DNA (1011bp)
protein (337aa)
Site-specific recombinase, phage integrase family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHX2_THIDA rbh
phage integrase site specific recombinase
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:AAZ97761.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus
scnpilot_p_inoc_scaffold_3399_2
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1309..2751
-----------------
DNA (1443bp)
protein (481aa)
dcm; DNA (cytosine-5-)-methyltransferase family protein (EC:2.1.1.37)
DNA-cytosine methyltransferase {ECO:0000313|EMBL:ABD08021.1}; EC=2.1.1.37 {ECO:0000313|EMBL:ABD08021.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobi
DNA-cytosine methyltransferase n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUT9_RHOP2 rbh
scnpilot_p_inoc_scaffold_3399_3
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2760..3854
-----------------
DNA (1095bp)
protein (365aa)
Putative uncharacterized protein n=1 Tax=Rhodopseudomonas palustris (strain HaA2) RepID=Q2IUU0_RHOP2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABD08020.1}; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas
scnpilot_p_inoc_scaffold_3399_4
unknown

Not on your lists

comp(4090..4374)
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3399_5
unknown

Not on your lists

comp(4371..4574)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3399_6
unknown

Not on your lists

4834..5325
-----------------
DNA (492bp)
protein (164aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3399_7

Not on your lists

comp(5409..6134)
-----------------
DNA (726bp)
protein (242aa)
Putative helicase n=1 Tax=Thauera sp. 27 RepID=N6XFN3_9RHOO
Putative AAA ATPase {ECO:0000313|EMBL:AKH47252.1}; TaxID=186617 species="Viruses; environmental samples.;" source="uncultured marine virus.;"
AAA domain protein
scnpilot_p_inoc_scaffold_3399_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6134..6472)
-----------------
DNA (339bp)
protein (113aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHV2_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97781.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
scnpilot_p_inoc_scaffold_3399_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7065..7640
-----------------
DNA (576bp)
protein (192aa)
peroxiredoxin-like protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] id=12495641 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
peroxiredoxin-like protein; K03564 peroxiredoxin Q/BCP [EC:1.11.1.15] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
peroxiredoxin-like protein
scnpilot_p_inoc_scaffold_3399_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7633..8874
-----------------
DNA (1242bp)
protein (414aa)
diguanylate cyclase/phosphodiesterase id=12495640 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
diguanylate cyclase/phosphodiesterase Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_3399_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8967..9560)
-----------------
DNA (594bp)
protein (198aa)
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] id=12495639 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; K00995 CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_cur
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
scnpilot_p_inoc_scaffold_3399_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9538..9873)
-----------------
DNA (336bp)
protein (112aa)
ATP-dependent helicase HrpA; K03578 ATP-dependent helicase HrpA [EC:3.6.4.13] id=12495638 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
ATP-dependent helicase HrpA
ATP-dependent helicase HrpA {ECO:0000313|EMBL:AAZ97961.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacill
Displaying 12 items

View Taxonomy