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scnpilot_p_inoc_scaffold_3589

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3589_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..737
DNA (735bp) protein (245aa)
ATPase component ABC-type transport system; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] id=12495137 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
ATPase component ABC-type transport system; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=GWE1_Thiobacillus_62_9_curated
ABC transporter ATPase
scnpilot_p_inoc_scaffold_3589_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

810..2243
DNA (1434bp) protein (478aa)
RNA polymerase factor sigma-54 (EC:2.7.7.6); K03092 RNA polymerase sigma-54 factor Tax=GWE1_Thiobacillus_62_9_curated
RNA polymerase factor sigma-54 (EC:2.7.7.6)
RNA polymerase subunit sigma-54 n=1 Tax=Thiobacillus thioparus RepID=UPI0003749A25 rbh
scnpilot_p_inoc_scaffold_3589_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2399..2734
DNA (336bp) protein (112aa)
30S ribosomal protein S30P / sigma 54 modulation protein; K05808 putative sigma-54 modulation protein id=12495135 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
30S ribosomal protein S30
Possible Sigma 54 modulation protein/ribosomal protein S30EA {ECO:0000313|EMBL:AAZ96485.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; T
scnpilot_p_inoc_scaffold_3589_4
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2828..3283
DNA (456bp) protein (152aa)
PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] id=12495134 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
PTS IIA-like nitrogen-regulatory protein PtsN; K02806 PTS system, nitrogen regulatory IIA component [EC:2.7.1.69] Tax=GWE1_Thiobacillus_62_9_curated
PTS IIA-like nitrogen-regulatory protein PtsN
scnpilot_p_inoc_scaffold_3589_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3300..4253
DNA (954bp) protein (318aa)
HPr kinase/phosphorylase (EC:2.7.1.-); K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] id=12495133 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
HPr kinase/phosphorylase (EC:2.7.1.-); K06023 HPr kinase/phosphorylase [EC:2.7.11.- 2.7.4.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
HPr kinase/phosphorylase (EC:2.7.1.-)
scnpilot_p_inoc_scaffold_3589_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4254..5090
DNA (837bp) protein (279aa)
hypothetical protein; K06958 UPF0042 nucleotide-binding protein id=12495132 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein; K06958 UPF0042 nucleotide-binding protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3589_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5090..5455
DNA (366bp) protein (122aa)
hypothetical protein id=12495131 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3589_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5436..5987
DNA (552bp) protein (184aa)
hypothetical protein; K00805 heptaprenyl diphosphate synthase [EC:2.5.1.30] id=12495130 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein; K00805 heptaprenyl diphosphate synthase [EC:2.5.1.30] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3589_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5972..6589
DNA (618bp) protein (206aa)
aromatic acid decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] id=12495129 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
aromatic acid decarboxylase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
aromatic acid decarboxylase
scnpilot_p_inoc_scaffold_3589_10
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6586..7182
DNA (597bp) protein (199aa)
peptidase S16; K07157 id=12495128 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
peptidase S16; K07157 Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
peptidase S16
scnpilot_p_inoc_scaffold_3589_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7182..7733
DNA (552bp) protein (184aa)
hypothetical protein id=12495127 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3589_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7730..7930
DNA (201bp) protein (67aa)
hypothetical protein id=12495126 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_scaffold_3589_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7960..8688)
DNA (729bp) protein (243aa)
HesA/MoeB/ThiF family protein id=12495125 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
HesA/MoeB/ThiF family protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
HesA/MoeB/ThiF family protein
scnpilot_p_inoc_scaffold_3589_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8705..8905
DNA (201bp) protein (67aa)
hypothetical protein id=12495124 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_3589_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8940..9500
DNA (561bp) protein (187aa)
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB id=12495123 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
greB; transcription elongation factor GreB; K04760 transcription elongation factor GreB Tax=GWE1_Thiobacillus_62_9_curated
greB; transcription elongation factor GreB
Displaying 15 items

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