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scnpilot_p_inoc_scaffold_1012

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Displaying items 1-30 of 45 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1012_1
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(72..416)
DNA (345bp) protein (115aa)
Putative uncharacterized protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SHR7_THIDA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ97816.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
scnpilot_p_inoc_scaffold_1012_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(948..1337)
DNA (390bp) protein (130aa)
Pilus assembly protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEU4_THIDA
pilus assembly protein
Pilus assembly protein {ECO:0000313|EMBL:AAZ97818.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus de
scnpilot_p_inoc_scaffold_1012_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1590..2684
DNA (1095bp) protein (365aa)
Putative D-amino acid oxidase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SEU3_THIDA rbh
D-amino acid oxidase rbh
Putative D-amino acid oxidase {ECO:0000313|EMBL:AAZ97819.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.
scnpilot_p_inoc_scaffold_1012_4
Candidatus Accumulibacter sp. SK-12, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2759..3328
DNA (570bp) protein (190aa)
Putative uncharacterized protein n=1 Tax=Nitrosococcus watsoni (strain C-113) RepID=D8K539_NITWC
Uncharacterized protein {ECO:0000313|EMBL:EXI69781.1}; TaxID=1454001 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. SK-12.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1012_5
Candidatus Contendobacter odensis, Candidatus Contendobacter, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3551..4126
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Acidithiobacillus thiooxidans RepID=UPI00026253B8
Uncharacterized protein {ECO:0000313|EMBL:CDH46940.1}; TaxID=1400861 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Contendobacter.;" source="Candidatus Contend
hypothetical protein
scnpilot_p_inoc_scaffold_1012_6
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4119..5039
DNA (921bp) protein (307aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036BB5B5
hypothetical protein; K07276 hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1012_7
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5046..6185
DNA (1140bp) protein (380aa)
glycosyl transferase n=1 Tax=Thiobacillus denitrificans RepID=UPI00036D7C94 rbh
glycosyltransferase
Putative glycosyltransferase {ECO:0000313|EMBL:AAZ97821.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacil
scnpilot_p_inoc_scaffold_1012_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6331..7467
DNA (1137bp) protein (379aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003826773 rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_scaffold_1012_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7715..8467
DNA (753bp) protein (251aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00036E76B5 rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
glycosyl transferase
scnpilot_p_inoc_scaffold_1012_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8467..9306
DNA (840bp) protein (280aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000374F762 rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1012_11
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9312..10382
DNA (1071bp) protein (357aa)
hypothetical protein id=12494563 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
glycosyltransferase
scnpilot_p_inoc_scaffold_1012_12
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10389..11369)
DNA (981bp) protein (327aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI0003685F31 rbh
transferase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
transferase
scnpilot_p_inoc_scaffold_1012_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11366..13198)
DNA (1833bp) protein (611aa)
multidrug MFS transporter n=1 Tax=Thiobacillus thioparus RepID=UPI0003737E24 rbh
putative epimerase/dehydratase-like biosynthesis protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
epimerase/dehydratase-like biosynthesis protein
scnpilot_p_inoc_scaffold_1012_14
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13188..14156)
DNA (969bp) protein (323aa)
hypothetical protein n=1 Tax=Thiobacillus thioparus RepID=UPI00036EB4AF
putative undecaprenyl phosphate N-acetylglucosaminyltransferase Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
undecaprenyl phosphate N-acetylglucosaminyltransferase
scnpilot_p_inoc_scaffold_1012_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14153..15109)
DNA (957bp) protein (319aa)
Putative UDP-glucose 4-epimerase id=1345546 bin=GWE1_T_denit_62_9 species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
putative UDP-glucose 4-epimerase Tax=GWE1_Thiobacillus_62_9_curated
UDP-glucose 4-epimerase
scnpilot_p_inoc_scaffold_1012_16
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15158..16291)
DNA (1134bp) protein (378aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=S9ZJD3_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPZ14691.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
group 1 glycosyl transferase
scnpilot_p_inoc_scaffold_1012_17
Cupriavidus taiwanensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16288..17358)
DNA (1071bp) protein (357aa)
Glycosyl transferase, group 1 n=1 Tax=Cupriavidus taiwanensis (strain R1 / LMG 19424) RepID=B3RC88_CUPTR rbh
wbpY; group 1 glycosyl transferase
Glycosyl transferase, group 1 {ECO:0000313|EMBL:CAQ72513.1}; TaxID=164546 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus t
scnpilot_p_inoc_scaffold_1012_18
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17556..19283
DNA (1728bp) protein (576aa)
peptidase n=1 Tax=Aquaspirillum serpens RepID=UPI0003B535CC rbh
type I secretion system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
type I secretion system ATPase
scnpilot_p_inoc_scaffold_1012_19
Candidatus Accumulibacter sp. SK-02, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19280..20653
DNA (1374bp) protein (458aa)
Type I secretion system membrane fusion protein n=1 Tax=Pseudomonas resinovorans NBRC 106553 RepID=S6AHQ8_PSERE rbh
Type I secretion system membrane fusion protein PrsE {ECO:0000313|EMBL:KFB78200.1}; TaxID=1453999 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus
type I secretion system membrane fusion protein
scnpilot_p_inoc_scaffold_1012_20
Sulfuricella denitrificans, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20655..22031
DNA (1377bp) protein (459aa)
TolC family type I secretion outer membrane protein n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B8S1_9PROT
TolC family type I secretion outer membrane protein
TolC family type I secretion outer membrane protein {ECO:0000313|EMBL:BAN36717.1}; TaxID=1163617 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.
scnpilot_p_inoc_scaffold_1012_21
R_Burkholderiales_61_11, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22318..23097
DNA (780bp) protein (260aa)
SapC family protein n=1 Tax=uncultured bacterium RepID=K2FGI9_9BACT
SapC family protein Tax=RIFCSPHIGHO2_12_FULL_Burkholderiales_61_11_curated
Peptide transport system permease protein sapC
scnpilot_p_inoc_scaffold_1012_22
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23301..23579)
DNA (279bp) protein (93aa)
RelE/StbE family addiction module toxin n=1 Tax=Thauera terpenica 58Eu RepID=S9ZT87_9RHOO
RelE/StbE family addiction module toxin {ECO:0000313|EMBL:EPZ16737.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera te
serine/threonine protein phosphatase
scnpilot_p_inoc_scaffold_1012_23
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23576..23809)
DNA (234bp) protein (78aa)
Uncharacterized protein n=1 Tax=Thauera phenylacetica B4P RepID=N7A020_9RHOO
Uncharacterized protein {ECO:0000313|EMBL:ENO97724.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.
hypothetical protein
scnpilot_p_inoc_scaffold_1012_24
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23927..24250)
DNA (324bp) protein (108aa)
Plasmid stabilization system protein n=1 Tax=Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM B-2133 / 20Z) RepID=G4SYG4_META2
Plasmid stabilization system protein
Plasmid stabilization system protein {ECO:0000313|EMBL:CCE22165.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source=
scnpilot_p_inoc_scaffold_1012_25
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24250..24531)
DNA (282bp) protein (94aa)
CopG family transcripitonal regulator n=1 Tax=Methylomicrobium buryatense RepID=UPI000381B557
transcriptional regulators (CopG/Arc/MetJ DNA-binding domain)
Putative Transcriptional regulators (CopG/Arc/MetJ DNA-binding domain) {ECO:0000313|EMBL:CCE22164.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococc
scnpilot_p_inoc_scaffold_1012_26
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24578..25360)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu RepID=T0AV49_9RHOO rbh
Uncharacterized protein {ECO:0000313|EMBL:EPZ16739.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
tnp24; transposase
scnpilot_p_inoc_scaffold_1012_27
Sulfuricurvum kujiense, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25572..29837)
DNA (4266bp) protein (1422aa)
Outer membrane adhesin like proteiin n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U373_SULKY rbh
outer membrane adhesin-like protein
Outer membrane adhesin like proteiin {ECO:0000313|EMBL:ADR34770.1}; TaxID=709032 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Sulfuricurvum.;" source
scnpilot_p_inoc_scaffold_1012_28
RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30255..31475
DNA (1221bp) protein (407aa)
hypothetical protein n=1 Tax=Burkholderia sp. WSM4176 RepID=UPI000368FB6E
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_62_58_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1012_29
Massilia consociata, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31713..32999
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Duganella zoogloeoides RepID=UPI000360D819
Uncharacterized protein {ECO:0000313|EMBL:KFI08584.1}; TaxID=760117 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Massilia consociata.;"
scnpilot_p_inoc_scaffold_1012_30
Tetrasphaera elongata, Tetrasphaera, Micrococcales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

33274..36249
DNA (2976bp) protein (992aa)
Uncharacterized protein n=1 Tax=Tetrasphaera elongata Lp2 RepID=N0E5B7_9MICO rbh
Uncharacterized protein {ECO:0000313|EMBL:CCH70429.1}; TaxID=1193181 species="Bacteria; Actinobacteria; Micrococcales; Intrasporangiaceae; Tetrasphaera.;" source="Tetrasphaera elongata Lp2.;"
putative glycosyl transferase, family 2
Displaying items 1-30 of 45 in total

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