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scnpilot_p_inoc_scaffold_1182

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1182_1
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..356)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI00037B185C
integrase family protein Tax=GWE1_Thiobacillus_62_9_curated
integrase family protein
scnpilot_p_inoc_scaffold_1182_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1297..2346
DNA (1050bp) protein (350aa)
cytochrome C n=1 Tax=Thiobacillus denitrificans RepID=UPI00037CE718
cytochrome c
Putative cytochrome c {ECO:0000313|EMBL:AAZ98498.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sourc
scnpilot_p_inoc_scaffold_1182_3
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2343..2801
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000365E9DA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98497.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" sou
scnpilot_p_inoc_scaffold_1182_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2826..4628
DNA (1803bp) protein (601aa)
histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales
Histidine Kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI36_THIDA rbh
scnpilot_p_inoc_scaffold_1182_5
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4612..5241
DNA (630bp) protein (210aa)
Two Component Transcriptional Regulator, LuxR family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI37_THIDA rbh
LuxR family transcriptional regulator rbh
Two Component Transcriptional Regulator, LuxR family {ECO:0000313|EMBL:AAZ97696.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacil
scnpilot_p_inoc_scaffold_1182_6
Sphingomonas sp. MM-1, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5587..5955)
DNA (369bp) protein (123aa)
Dihydroneopterin aldolase n=1 Tax=Sphingomonas sp. MM-1 RepID=M4S3Z7_9SPHN
dihydroneopterin aldolase
Dihydroneopterin aldolase {ECO:0000313|EMBL:AGH50770.1}; TaxID=745310 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas
scnpilot_p_inoc_scaffold_1182_7
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6064..7308)
DNA (1245bp) protein (415aa)
Serine hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00051}; Short=SHMT {ECO:0000256|HAMAP-Rule:MF_00051};; Short=Serine methylase {ECO:0000256|HAMAP-Rule:MF_00051};; EC=2.1.2.1 {ECO:0000256|HAM
Serine hydroxymethyltransferase n=1 Tax=Ralstonia pickettii DTP0602 RepID=U3QTY9_RALPI
serine hydroxymethyltransferase
scnpilot_p_inoc_scaffold_1182_8
CG_Beta_01, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7371..9659)
DNA (2289bp) protein (763aa)
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=CG_Beta_01
5-methyltetrahydropteroyltriglutamate/homocysteine S-methyltransferase (EC:2.1.1.14) rbh
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=1 Tax=Methylomicrobium album BG8 RepID=H8GPB8_METAL rbh
scnpilot_p_inoc_scaffold_1182_9
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9827..10669
DNA (843bp) protein (281aa)
Transcriptional regulator, LysR family n=1 Tax=Thioalkalivibrio sp. (strain HL-EbGR7) RepID=B8GLV9_THISH rbh
LysR family transcriptional regulator
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ACL71712.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" sou
scnpilot_p_inoc_scaffold_1182_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11415..11846)
DNA (432bp) protein (144aa)
ATP synthase epsilon chain 1 n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=ATPE1_THIDA
H+-transporting two-sector ATPase, delta/subunit epsilon
ATP synthase epsilon chain 1 {ECO:0000255|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit 1 {ECO:0000255|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit 1 {ECO:0000255|HAMAP-Rule:MF_00530}
scnpilot_p_inoc_scaffold_1182_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11858..14953)
DNA (3096bp) protein (1032aa)
Putative tetrathionate reductase, subunit A n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI39_THIDA rbh
tetrathionate reductase subunit A rbh
Putative tetrathionate reductase, subunit A {ECO:0000313|EMBL:AAZ97694.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae;
scnpilot_p_inoc_scaffold_1182_12
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14964..16055)
DNA (1092bp) protein (364aa)
Putative tetrathionate reductase subunit C n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI40_THIDA rbh
tetrathionate reductase subunit C
Putative tetrathionate reductase subunit C {ECO:0000313|EMBL:AAZ97693.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae;
scnpilot_p_inoc_scaffold_1182_13
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16058..16804)
DNA (747bp) protein (249aa)
Putative tetrathionate reductase subunit B n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SI41_THIDA rbh
tetrathionate reductase subunit B
Putative tetrathionate reductase subunit B {ECO:0000313|EMBL:AAZ97692.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae;
scnpilot_p_inoc_scaffold_1182_14
Sulfuricella sp. T08, Sulfuricella, Sulfuricellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17040..17810)
DNA (771bp) protein (257aa)
Thiol:disulfide interchange protein DsbG n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF75_THIDA rbh
Dihydroneopterin aldolase {ECO:0000313|EMBL:GAO35043.1}; TaxID=1632857 species="Bacteria; Proteobacteria; Betaproteobacteria; Sulfuricellales; Sulfuricellaceae; Sulfuricella.;" source="Sulfuricella sp
dsbG; disulfide isomerase/thiol-disulfide oxidase
scnpilot_p_inoc_scaffold_1182_15
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17843..18409)
DNA (567bp) protein (189aa)
Putative thiol:disulfide interchange protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF74_THIDA
thiol:disulfide interchange protein
Putative thiol:disulfide interchange protein {ECO:0000313|EMBL:AAZ98741.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae
scnpilot_p_inoc_scaffold_1182_16
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18414..19241)
DNA (828bp) protein (276aa)
Probable thiol:disulfide interchange protein n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF73_THIDA rbh
thiol:disulfide interchange protein
Probable thiol:disulfide interchange protein {ECO:0000313|EMBL:AAZ98742.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae
scnpilot_p_inoc_scaffold_1182_17
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19244..21028)
DNA (1785bp) protein (595aa)
thiol:disulfide interchange protein DsbD (EC:1.8.1.8) rbh
Thiol:disulfide interchange protein DsbD {ECO:0000256|HAMAP-Rule:MF_00399}; EC=1.8.1.8 {ECO:0000256|HAMAP-Rule:MF_00399};; Protein-disulfide reductase {ECO:0000256|HAMAP-Rule:MF_00399}; Flags: Precurs
Thiol:disulfide interchange protein DsbD n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF72_THIDA rbh
scnpilot_p_inoc_scaffold_1182_18
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21138..21803
DNA (666bp) protein (222aa)
Two component Transcriptional regulator, Winged helix family n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF71_THIDA rbh
two component transcriptional regulator
Two component Transcriptional regulator, Winged helix family {ECO:0000313|EMBL:AAZ98744.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hy
scnpilot_p_inoc_scaffold_1182_19
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21800..23209
DNA (1410bp) protein (470aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales
Periplasmic Sensor Signal Transduction Histidine Kinase n=1 Tax=Thiobacillus denitrificans (strain ATCC 25259) RepID=Q3SF70_THIDA rbh
periplasmic sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_1182_20
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23398..24189)
DNA (792bp) protein (264aa)
hypothetical protein n=1 Tax=Thiobacillus denitrificans RepID=UPI000360D102
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
membrane protein
scnpilot_p_inoc_scaffold_1182_21
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24328..24453)
DNA (126bp) protein (42aa)
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
scnpilot_p_inoc_scaffold_1182_22
Psychrobacter cryohalolentis, Psychrobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24675..25349)
DNA (675bp) protein (225aa)
Putative (L31491) ORF2; putative (Plasmid pTOM9) n=1 Tax=Psychrobacter cryohalolentis (strain K5) RepID=Q1Q9V5_PSYCK
hypothetical protein
Putative (L31491) ORF2 putative (Plasmid pTOM9) {ECO:0000313|EMBL:ABE75548.1}; TaxID=335284 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Psychrobacter.;" sou
scnpilot_p_inoc_scaffold_1182_23
Polaromonas sp. CG9_12, Polaromonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25375..25506)
DNA (132bp) protein (44aa)
Membrane protein n=1 Tax=Psychrobacter sp. G RepID=S4Z428_9GAMM
membrane protein
Putative ORF1 [Plasmid pTOM9] {ECO:0000313|EMBL:CDS53349.1}; TaxID=1504672 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Polaromonas.;" source="Polaromonas sp
Displaying 23 items

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