ggKbase home page

scnpilot_p_inoc_scaffold_1955

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1955_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31..366)
DNA (336bp) protein (112aa)
putative sulfite reductase; K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] id=12494747 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
putative sulfite reductase; K11179 tRNA 2-thiouridine synthesizing protein E [EC:2.8.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
sulfite reductase
scnpilot_p_inoc_scaffold_1955_2
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(638..1033)
DNA (396bp) protein (132aa)
DsrF protein; K07236 tRNA 2-thiouridine synthesizing protein C id=12494749 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DsrF protein; K07236 tRNA 2-thiouridine synthesizing protein C Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DsrF protein
scnpilot_p_inoc_scaffold_1955_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1045..1404)
DNA (360bp) protein (120aa)
DsrE protein; K07235 tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] id=12494750 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
DsrE protein; K07235 tRNA 2-thiouridine synthesizing protein D [EC:2.8.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
DsrE protein
scnpilot_p_inoc_scaffold_1955_4
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1493..2563)
DNA (1071bp) protein (357aa)
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3); K11181 sulfite reductase, dissimilatory-type beta subunit [EC:1.8.99.3] id=12494751 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3); K11181 sulfite reductase, dissimilatory-type beta subunit [EC:1.8.99.3] Tax=RBG_16_Gallionellales_57_15_curated
sulfite reductase, dissimilatory-type subunit beta (EC:1.8.99.3)
scnpilot_p_inoc_scaffold_1955_5
RBG_16_Gallionellales_57_15_curated, Gallionellales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2629..3933)
DNA (1305bp) protein (435aa)
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3); K11180 sulfite reductase, dissimilatory-type alpha subunit [EC:1.8.99.3] id=12494752 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3); K11180 sulfite reductase, dissimilatory-type alpha subunit [EC:1.8.99.3] Tax=RBG_16_Gallionellales_57_15_curated
sulfite reductase, dissimilatory-type subunit alpha (EC:1.8.99.3)
scnpilot_p_inoc_scaffold_1955_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4373..4594
DNA (222bp) protein (74aa)
hypothetical protein id=12494753 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1955_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4591..5247
DNA (657bp) protein (219aa)
hypothetical protein id=12494754 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1955_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5303..5635
DNA (333bp) protein (111aa)
putative sulfite reductase gamma chain id=12494755 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
sulfite reductase gamma chain
Putative sulfite reductase gamma chain {ECO:0000313|EMBL:AAZ98441.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source=
scnpilot_p_inoc_scaffold_1955_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5718..6566
DNA (849bp) protein (283aa)
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2); K01011 thiosulfate/3-mercaptopyruvate sulfurtransferase [EC:2.8.1.1 2.8.1.2] id=12494756 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
3-mercaptopyruvate sulfurtransferase (EC:2.8.1.2)
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus denit
scnpilot_p_inoc_scaffold_1955_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6569..7189
DNA (621bp) protein (207aa)
hypothetical protein id=12494757 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98443.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
scnpilot_p_inoc_scaffold_1955_11
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7198..8109
DNA (912bp) protein (304aa)
hypothetical protein id=12494758 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAZ98444.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus d
scnpilot_p_inoc_scaffold_1955_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8159..9409
DNA (1251bp) protein (417aa)
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] id=12494759 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hemA; glutamyl-tRNA reductase (EC:1.2.1.70); K02492 glutamyl-tRNA reductase [EC:1.2.1.70] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hemA; glutamyl-tRNA reductase (EC:1.2.1.70)
scnpilot_p_inoc_scaffold_1955_13
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9406..10488
DNA (1083bp) protein (361aa)
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 id=12494760 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
prfA; peptide chain release factor 1; K02835 peptide chain release factor 1 Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
prfA; peptide chain release factor 1
scnpilot_p_inoc_scaffold_1955_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10485..11354
DNA (870bp) protein (290aa)
modification methylase HemK; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] id=12494761 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
modification methylase HemK; K02493 release factor glutamine methyltransferase [EC:2.1.1.-] Tax=GWE1_Thiobacillus_62_9_curated
modification methylase HemK
scnpilot_p_inoc_scaffold_1955_15
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11498..12160
DNA (663bp) protein (221aa)
hypothetical protein id=12494762 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1955_16
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12241..12453
DNA (213bp) protein (71aa)
hypothetical protein id=12494763 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_scaffold_1955_17
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12450..13370
DNA (921bp) protein (307aa)
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-); K00924 [EC:2.7.1.-] id=12494764 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-); K00924 [EC:2.7.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Hpr(Ser) kinase/phosphatase (EC:2.7.1.-)
scnpilot_p_inoc_scaffold_1955_18
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13445..14473
DNA (1029bp) protein (343aa)
hypothetical protein id=12494765 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1955_19
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14536..14856
DNA (321bp) protein (107aa)
glutaredoxin-like protein; K07390 monothiol glutaredoxin id=12494766 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
glutaredoxin-like protein; K07390 monothiol glutaredoxin Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
glutaredoxin-like protein
scnpilot_p_inoc_scaffold_1955_20
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14920..15696)
DNA (777bp) protein (259aa)
two component Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG id=12494767 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
two component Fis family transcriptional regulator; K07712 two-component system, NtrC family, nitrogen regulation response regulator GlnG Tax=GWE1_Thiobacillus_62_9_curated
Fis family transcriptional regulator
Displaying 20 items

View Taxonomy