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scnpilot_p_inoc_scaffold_5815

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Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_5815_1
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..308)
DNA (306bp) protein (102aa)
SLT domain-containing protein; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] id=12493290 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
SLT domain-containing protein; K08309 soluble lytic murein transglycosylase [EC:3.2.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
SLT domain-containing protein
scnpilot_p_inoc_scaffold_5815_2
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(365..1882)
DNA (1518bp) protein (506aa)
L-threonine ammonia-lyase (EC:4.3.1.19); K01754 threonine dehydratase [EC:4.3.1.19] id=12493289 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
L-threonine ammonia-lyase (EC:4.3.1.19)
L-threonine dehydratase {ECO:0000256|RuleBase:RU362012}; EC=4.3.1.19 {ECO:0000256|RuleBase:RU362012};; Threonine deaminase {ECO:0000256|RuleBase:RU362012}; TaxID=292415 species="Bacteria; Proteobacter
scnpilot_p_inoc_scaffold_5815_3
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1978..2619
DNA (642bp) protein (214aa)
cbbI; ribose-5-phosphate isomerase A (EC:5.3.1.6); K01807 ribose 5-phosphate isomerase A [EC:5.3.1.6] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
cbbI; ribose-5-phosphate isomerase A (EC:5.3.1.6)
id=12493288 bin=THIO_HI tax=THIO_HI organism_group=Betaproteobacteria rbh
scnpilot_p_inoc_scaffold_5815_4
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2817..3572)
DNA (756bp) protein (252aa)
hypothetical protein id=12493286 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_5815_5
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3625..4233)
DNA (609bp) protein (203aa)
dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] id=12493285 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
dephospho-CoA kinase (EC:2.7.1.24); K00859 dephospho-CoA kinase [EC:2.7.1.24] Tax=GWE1_Thiobacillus_62_9_curated
dephospho-CoA kinase (EC:2.7.1.24)
scnpilot_p_inoc_scaffold_5815_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4233..5084)
DNA (852bp) protein (284aa)
type 4 prepilin peptidase 1 (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] id=12493284 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
type 4 prepilin peptidase 1 (EC:3.4.23.43); K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
type 4 prepilin peptidase 1 (EC:3.4.23.43)
scnpilot_p_inoc_scaffold_5815_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5084..6304)
DNA (1221bp) protein (407aa)
type II secretion system protein F n=1 Tax=Thiobacillus thioparus RepID=UPI00037135CB rbh
type IV pilus assembly protein PilC; K02653 type IV pilus assembly protein PilC Tax=GWE1_Thiobacillus_62_9_curated
type IV pilus assembly protein PilC
scnpilot_p_inoc_scaffold_5815_8
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6317..6853)
DNA (537bp) protein (179aa)
type IV pilus assembly protein, PilB; K02652 type IV pilus assembly protein PilB id=12493282 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
type IV pilus assembly protein, PilB
Type IV pilus assembly protein, PilB {ECO:0000313|EMBL:AAZ98323.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="T
Displaying 8 items

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