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scnpilot_p_inoc_scaffold_2488

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2488_1

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1..228
DNA (228bp) protein (76aa)
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24); K00973 glucose-1-phosphate thymidylyltransferase [EC:2.7.7.24] id=12495429 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Glucose-1-phosphate thymidylyltransferase (DTDP-glucose synthase) (DTDP-glucose pyrophosphorylase) {ECO:0000313|EMBL:CBI11171.1}; EC=2.7.7.24 {ECO:0000313|EMBL:CBI11171.1};; TaxID=410659 species="uncl
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
scnpilot_p_inoc_scaffold_2488_2
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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386..1630
DNA (1245bp) protein (415aa)
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein id=12495428 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
LolC/E family lipoprotein releasing system, transmembrane protein; K09808 lipoprotein-releasing system permease protein Tax=GWE1_Thiobacillus_62_9_curated
LolC/E family lipoprotein releasing system, transmembrane protein
scnpilot_p_inoc_scaffold_2488_3
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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1623..2303
DNA (681bp) protein (227aa)
lipoprotein releasing system, ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] id=12495427 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
lipoprotein releasing system, ATP-binding protein; K09810 lipoprotein-releasing system ATP-binding protein [EC:3.6.3.-] Tax=GWE1_Thiobacillus_62_9_curated
lipoprotein releasing system, ATP-binding protein
scnpilot_p_inoc_scaffold_2488_4
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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2316..4658
DNA (2343bp) protein (781aa)
DNA internalization-related competence protein ComEC/Rec2; K02238 competence protein ComEC id=12495426 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
DNA internalization-related competence protein ComEC/Rec2
DNA internalization-related competence protein ComEC/Rec2 {ECO:0000313|EMBL:AAZ97712.1}; Flags: Precursor;; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydro
scnpilot_p_inoc_scaffold_2488_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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4651..6846
DNA (2196bp) protein (732aa)
GTP diphosphokinase, RelA/SpoT protein (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] id=12495425 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
GTP diphosphokinase, RelA/SpoT protein (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
GTP diphosphokinase, RelA/SpoT protein (EC:2.7.6.5)
scnpilot_p_inoc_scaffold_2488_6
unknown

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6843..7049
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2488_7
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6953..7990)
DNA (1038bp) protein (346aa)
tRNA 2-selenouridine synthase; K06917 tRNA 2-selenouridine synthase [EC:2.9.1.-] id=12495424 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
tRNA 2-selenouridine synthase; K06917 tRNA 2-selenouridine synthase [EC:2.9.1.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
tRNA 2-selenouridine synthase
scnpilot_p_inoc_scaffold_2488_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8124..8297)
DNA (174bp) protein (58aa)
hypothetical protein id=12495423 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
scnpilot_p_inoc_scaffold_2488_9
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8422..8865)
DNA (444bp) protein (148aa)
smpB; SsrA-binding protein; K03664 SsrA-binding protein id=12495422 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
smpB; SsrA-binding protein
SsrA-binding protein {ECO:0000255|HAMAP-Rule:MF_00023}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobacillus
scnpilot_p_inoc_scaffold_2488_10
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8916..9350
DNA (435bp) protein (145aa)
hypothetical protein id=12495421 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2488_11
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9347..9703
DNA (357bp) protein (119aa)
hypothetical protein; K09801 hypothetical protein id=12495420 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K09801 hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2488_12
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9740..10168)
DNA (429bp) protein (143aa)
hypothetical protein id=12495419 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2488_13
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10218..10556)
DNA (339bp) protein (113aa)
hypothetical protein; K06078 murein lipoprotein id=12495418 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K06078 murein lipoprotein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2488_14
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10782..12245
DNA (1464bp) protein (488aa)
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] id=12495417 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205); K00088 IMP dehydrogenase [EC:1.1.1.205] Tax=GWE1_Thiobacillus_62_9_curated
inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
scnpilot_p_inoc_scaffold_2488_15
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12242..12559
DNA (318bp) protein (106aa)
hypothetical protein; K09797 hypothetical protein id=12495416 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
hypothetical protein; K09797 hypothetical protein Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
Displaying 15 items

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