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scnpilot_p_inoc_scaffold_2554

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2554_1
Magnetospira sp. QH-2, Magnetospira, Rhodospirillales, Alphaproteobacteria, Proteobacteria, Bacteria

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2..1366
DNA (1365bp) protein (455aa)
putative beta-lactamase (EC:3.5.2.6)
Putative beta-lactamase {ECO:0000313|EMBL:CCQ72133.1}; EC=3.5.2.6 {ECO:0000313|EMBL:CCQ72133.1};; TaxID=1288970 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillac
putative hydrolase id=12494512 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
scnpilot_p_inoc_scaffold_2554_2

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comp(1574..1765)
DNA (192bp) protein (64aa)
Transposase of ISCARN35, IS4 family IS4 group n=1 Tax=mine drainage metagenome RepID=E6PS82_9ZZZZ
Transposase of ISCARN35, IS4 family IS4 group {ECO:0000313|EMBL:CBH97788.1}; TaxID=410659 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="mine drainage metagenome.;"
transposase, IS4 family protein
scnpilot_p_inoc_scaffold_2554_3
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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1956..3110
DNA (1155bp) protein (385aa)
Putative efflux system protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2ZY19_9SPHN rbh
Putative efflux system protein {ECO:0000313|EMBL:GAD50279.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" source="Novo
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_2554_4
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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3125..6343
DNA (3219bp) protein (1073aa)
RND transporter, hydrophobe/amphiphile efflux-1 family protein n=1 Tax=Sphingomonas sp. S17 RepID=F3WTA8_9SPHN rbh
DNA, contig: SP614 {ECO:0000313|EMBL:GAN12852.1}; TaxID=1219050 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucim
hydrophobe/amphiphile efflux-1 (HAE1) family transporter rbh
scnpilot_p_inoc_scaffold_2554_5
Novosphingobium tardaugens, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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6336..7769
DNA (1434bp) protein (478aa)
Putative outer membrane efflux protein n=1 Tax=Novosphingobium tardaugens NBRC 16725 RepID=U2YNV7_9SPHN rbh
Putative outer membrane efflux protein {ECO:0000313|EMBL:GAD50277.1}; TaxID=1219035 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" sour
NodT family RND efflux system outer membrane lipoprotein rbh
scnpilot_p_inoc_scaffold_2554_6
Lysobacter sp. A03, Lysobacter, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7826..9013
DNA (1188bp) protein (396aa)
major facilitator superfamily protein id=12494316 bin=THIO_HI species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
NODE_33, whole genome shotgun sequence {ECO:0000313|EMBL:KIQ96647.1}; TaxID=1199154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Lysobacter.;" source="Lys
major facilitator superfamily protein
scnpilot_p_inoc_scaffold_2554_7
Nitrosococcus watsonii, Nitrosococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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9038..10297
DNA (1260bp) protein (420aa)
amidohydrolase 3 id=12494315 bin=THIO_HI species=unknown genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
amidohydrolase 3
Amidohydrolase 3 {ECO:0000313|EMBL:ADJ29274.1}; TaxID=105559 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Nitrosococcus.;" source="Nitrosococcus watsoni (strain
scnpilot_p_inoc_scaffold_2554_8
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10460..11581)
DNA (1122bp) protein (374aa)
N6-adenine-specific DNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] id=12494160 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
N6-adenine-specific DNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=GWE1_Thiobacillus_62_9_curated
N-6 adenine-specific DNA methylase
scnpilot_p_inoc_scaffold_2554_9
unknown

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11612..11992
DNA (381bp) protein (127aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2554_10
Thiobacillus denitrificans, Thiobacillus, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11851..12264)
DNA (414bp) protein (138aa)
transmembrane protein; K08973 putative membrane protein id=12496477 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
transmembrane protein
Probable transmembrane protein {ECO:0000313|EMBL:AAZ98378.1}; TaxID=292415 species="Bacteria; Proteobacteria; Betaproteobacteria; Hydrogenophilales; Hydrogenophilaceae; Thiobacillus.;" source="Thiobac
Displaying 10 items

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