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scnpilot_p_inoc_scaffold_2823

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2823_1
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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63..1280
DNA (1218bp) protein (406aa)
acrA; acridine efflux pump protein; K03585 membrane fusion protein id=12493220 bin=THIO_HI species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
acrA; acridine efflux pump protein
Acriflavine resistance protein A {ECO:0000313|EMBL:CAL62512.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminii
scnpilot_p_inoc_scaffold_2823_2
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1293..4454
DNA (3162bp) protein (1054aa)
acrD; aminoglycoside/multidrug efflux pump; K03296 hydrophobic/amphiphilic exporter-1 (mainly G- bacteria), HAE1 family id=12493219 bin=THIO_HI species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Acriflavine resistance protein B {ECO:0000313|EMBL:CAL62513.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminii
acrD; aminoglycoside/multidrug efflux pump
scnpilot_p_inoc_scaffold_2823_3
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4447..5841
DNA (1395bp) protein (465aa)
smeF; outer membrane transport protein involved toxic tolerance id=12493218 bin=THIO_HI species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
smeF; outer membrane transport protein involved toxic tolerance
Outer membrane protein oprM {ECO:0000313|EMBL:CAL62514.1}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" source="Herminiimonas
scnpilot_p_inoc_scaffold_2823_4
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5838..6467
DNA (630bp) protein (210aa)
TetR family transcriptional regulator id=12493217 bin=THIO_HI species=Herminiimonas arsenicoxydans genus=Herminiimonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Putative transcriptional regulator, TetR family {ECO:0000313|EMBL:CAL62515.2}; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herminiimonas.;" s
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_2823_5
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(6516..8072)
DNA (1557bp) protein (519aa)
RNAse G (EC:3.1.4.-); K08301 ribonuclease G [EC:3.1.26.-] id=12493216 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
RNAse G (EC:3.1.4.-); K08301 ribonuclease G [EC:3.1.26.-] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
RNAse G (EC:3.1.4.-)
scnpilot_p_inoc_scaffold_2823_6
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8123..8734)
DNA (612bp) protein (204aa)
maf; Maf-like protein; K06287 septum formation protein id=12493215 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
maf; Maf-like protein; K06287 septum formation protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
maf; Maf-like protein
scnpilot_p_inoc_scaffold_2823_7
GWE1_Thiobacillus_62_9_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(8753..9223)
DNA (471bp) protein (157aa)
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] id=12493214 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
hypothetical protein; K00783 23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177] Tax=GWE1_Thiobacillus_62_9_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2823_8
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9229..9588)
DNA (360bp) protein (120aa)
Iojap-like protein; K09710 ribosome-associated protein id=12493213 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Iojap-like protein; K09710 ribosome-associated protein Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
Iojap-like protein
scnpilot_p_inoc_scaffold_2823_9
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9585..10235)
DNA (651bp) protein (217aa)
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] id=12493212 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18); K00969 nicotinate-nucleotide adenylyltransferase [EC:2.7.7.18] Tax=RIFOXYA1_FULL_Hydrogenophilales_63_33_curated
nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
scnpilot_p_inoc_scaffold_2823_10
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(10240..11319)
DNA (1080bp) protein (360aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] id=12493211 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41); K00147 glutamate-5-semialdehyde dehydrogenase [EC:1.2.1.41] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Displaying 10 items

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