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scnpilot_p_inoc_scaffold_2380_5

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: 3758..6835

Top 3 Functional Annotations

Value Algorithm Source
cation/multidrug efflux pump transmembrane protein; K07788 RND superfamily, multidrug transport protein MdtB id=12493017 bin=THIO_HI species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 98.3
  • Coverage: 872.0
  • Bit_score: 1618
  • Evalue 0.0
  • rbh
Cation/multidrug efflux pump transmembrane protein {ECO:0000313|EMBL:EIJ46733.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum similarity UNIPROT
DB: UniProtKB
  • Identity: 73.8
  • Coverage: 999.99
  • Bit_score: 1482
  • Evalue 0.0
cation/multidrug efflux pump transmembrane protein similarity KEGG
DB: KEGG
  • Identity: 74.1
  • Coverage: 999.99
  • Bit_score: 1480
  • Evalue 0.0

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Taxonomy

Herbaspirillum sp. GW103 → Herbaspirillum → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3078
GTGAACCCCTCGCGGCTTTTCATCCTGCGGCCGGTGGCCACCTCGCTGCTGATGCTGGCCATCCTGCTGGCCGGCGCGGTGGCGTTTCGTCTGCTGCCGCTGTCGGCGCTGCCCGAGGTGGACTACCCGACCATCCAGATCATGTCGCTCTATCCGGGGGCCAGCCCCGACGTCATCACCGCCACCCTCACTGCACCGCTGGAACGACAGCTCGGGCAGATGCCCGGCCTCCGGGAAATGTCCTCGACCAGTTCCGGCGGCGCCTCGGTCATCACGCTGCGCTTCAGTCTCGACCTGACGCTGGACGTGGCCGAACAGGAAGTGCAGGCCGCCATCAACGCCGCGTCCAACCTGCTGCCGACCGACATGCCGATGCCGCCGGTCTACAGCAAGATCAATCCGGCCGACGCTCCCATCCTCACCCTGGCGGTGACCTCGCCGTCGCTGCCGCTGGCGCGCCTGCACGATCTGGTGGAAAACCGCATCGCGCAAAAGATTTCGCAACTGCCGGGCGTCGGTCTGGTCAGCCTGGCCGGCGGCCGGCGGCCGGCGGTGCGTATCCAGGTCAATCCCCGAGCGCTGGCCGCATCGGGCCTGTCGCTCGAGGATCTGCGCACGGCCATCGGCACGGCCAACGTCAACACGCCCAAGGGCAGCTTCGACGGGGCGCTGCGCGCGTCGGCGATCGACGCCAACGACCAGTTGAAATCGGCCGACGACTACGTCAATCTGATCATTGCCTACAAAAACGGCGCGCCGATCCGCCTGCGGGATGTGGCGGATGTCATTGACAGTGCCGAGAACACGCGGCTGGCGGCCTGGGCCAACACGCGCCCGGGGGTGATTCTCAATGTGCAGCGCCAGCCCGGCGCCAACGTCATCGCGGTCACCGACCGCATCAAGGCCGCCCTGCCCGGCCTGCAGGCCAGTCTGCCGGGATCGGTCGACGTCACGCTGCTGTCCGACCGCACGGTCACCATTCGGGCCTCGGTGGCCGATGTGGAATTCTCGCTGCTGCTGGCGGTGGCGCTGGTGGTGATGGTGATCTACCTGTTCCTGCGCAAGGTCCCGGCGACGATCATTCCCAGCCTCGCGGTACCCATCTCGCTGGTCGGCACCTTCGGCGTCATGTACCTGGCCGGCTTCTCCATCAACAACCTGACCCTGATGGCGCTGACCATCGCCACCGGTTTCGTGGTCGACGACGCCATCGTGGTCATCGAGAACATCACGCGCCACATCGAGGAGGGCGAACCGCCGCTGGACGCCGCACTGAAGGGATCGAAGCAGATCGGCTTCACCATCATCTCGCTGACCTTCTCGCTGATTGCCGTGCTGATCCCGCTGCTGTTCATGGGCGACGTGGTCGGCCGGCTGTTCCACGAGTTCGCCATCACCCTGGCGGTGGCCATCCTGATTTCTGCCGTGGTGTCGCTGACCTTGACGCCGATGCTGTGCGCGCGCCTGCTGCGCGCCGAAACACCAGGGGCGCGCCATTCCACCGAATTCTTTCAACGCATCGTCGCGGCGTACGGCCGGGCGCTGGCCTGGGTACTGAACCACCAGAGTGCCACGCTGTGGGTCGCGGCCGCCACCCTCGGCCTGACCGTCGCGCTCTACGTCTGGATACCCAAGGGCTTCTTCCCGGTGCAGGACACAGGGCTCATCCAGGCGATCACCGAAGCCGACCAGTCGATTTCCTACCCTGCCATGGCCGGGCGCCAGCAGGCGCTGGCCGCCGTGATCCTCAAGGATCCGGCGGTGGCCAGCCTGTCGTCGTTCATCGGCGTGGACGGCGACAACGTCACGCTCAACAGCGGCCGCATGCAGATCGCCCTGAAGCCGCATGCGCAGCGCAGCGAACCGGCGACGGCCGTGATGCGCCGTCTGGCGGAAGCGGCCCGACAGGTGCCCGGCATCACCGTCCACATGCAGCCGGTTCAGGACCTGACCATCGAGGACCGGGTCTCGCGGGCACAGTATCAATTCACGCTCGGGTCGCCGGATTCGAAGGCGCTGGCCGAATGGGTGCCCCGGCTGGTCGCCCGGTTGAAGCAACTGCCGCAACTGTCCGACGTCGCCAGCGACCTGCAGAACAACGGTCTGCAGGCCTTTGTCGACATCGACCGCGATGCGGCCGGCCGGCTGGGCGTCACGGTGGCGGCGATCGACAATGCGCTGTACGACGCCTTCGGGCAGCGCCTGATCTCGACCATCTTCACCCAGTCGAGCCAGTACCGCGTCGTGCTGGAAGTCCAGCCGGCCTTCCAGGCCGGTCCCGCCGCGCTCGATGGCCTGTATGTGCCGACCGCCTCGGGACAGCAGGTGCCGCTCACCTCGGTGGCCCGCATCGAGGAACGCGACACCCCGCTCCTGATCAGTCATGTCGGCCAGTTCCCCGCCGCTACCGTGTCGTTCAACGTGGCCGCCGGTGCTTCGCTGGGCAGCGCCGTGAAGGCCATCCAGCAGGCCGAAACGGCACTTGGCCTGCCCATGTCCATCGAGACCAGCTTCCAGGGGGCGGCGCTGGCGTTCCAGTCTTCGCTGACCAACACCCTGCTGCTGATCCTGGCGGCGGTGGTGACGATGTACATCGTGCTCGGCGTGCTCTACGAGAATGCCATTCATCCCATCACCATCCTGTCCACCCTGCCATCGGCCGGGATTGGCGCCTTGCTGTCGCTGATGCTGGCGGGTAGCGAACTGGACGTGATCGGCATCATCGGCATCATTCTGCTGATCGGCATCGTCAAGAAGAACGCGATTCTCATGATCGACTTCGCATTGAGTGCGGAACGTGAACAGGGGCTTGCGCCACGTGAAGCGATCTACCAGGCGTGCCTGCTGCGGCTGCGCCCGATCCTGATGACCACCCTGGCCGCCATGCTGGGCGCCTTGCCGCTGATGCTGGGCACGGGCGTGGGTGCGGAACTGCGCCAGCCGCTGGGCCTGGCCATGGTCGGCGGCCTGCTGTTCAGCCAGATGCTGACCCTGTTCACCACGCCGGTGATCTACCTGGCCTTCGACCGGCTGGCGCGGCGCTTCCAGACGAGCCGATCCGCCGCTGAACCGGCATGA
PROTEIN sequence
Length: 1026
VNPSRLFILRPVATSLLMLAILLAGAVAFRLLPLSALPEVDYPTIQIMSLYPGASPDVITATLTAPLERQLGQMPGLREMSSTSSGGASVITLRFSLDLTLDVAEQEVQAAINAASNLLPTDMPMPPVYSKINPADAPILTLAVTSPSLPLARLHDLVENRIAQKISQLPGVGLVSLAGGRRPAVRIQVNPRALAASGLSLEDLRTAIGTANVNTPKGSFDGALRASAIDANDQLKSADDYVNLIIAYKNGAPIRLRDVADVIDSAENTRLAAWANTRPGVILNVQRQPGANVIAVTDRIKAALPGLQASLPGSVDVTLLSDRTVTIRASVADVEFSLLLAVALVVMVIYLFLRKVPATIIPSLAVPISLVGTFGVMYLAGFSINNLTLMALTIATGFVVDDAIVVIENITRHIEEGEPPLDAALKGSKQIGFTIISLTFSLIAVLIPLLFMGDVVGRLFHEFAITLAVAILISAVVSLTLTPMLCARLLRAETPGARHSTEFFQRIVAAYGRALAWVLNHQSATLWVAAATLGLTVALYVWIPKGFFPVQDTGLIQAITEADQSISYPAMAGRQQALAAVILKDPAVASLSSFIGVDGDNVTLNSGRMQIALKPHAQRSEPATAVMRRLAEAARQVPGITVHMQPVQDLTIEDRVSRAQYQFTLGSPDSKALAEWVPRLVARLKQLPQLSDVASDLQNNGLQAFVDIDRDAAGRLGVTVAAIDNALYDAFGQRLISTIFTQSSQYRVVLEVQPAFQAGPAALDGLYVPTASGQQVPLTSVARIEERDTPLLISHVGQFPAATVSFNVAAGASLGSAVKAIQQAETALGLPMSIETSFQGAALAFQSSLTNTLLLILAAVVTMYIVLGVLYENAIHPITILSTLPSAGIGALLSLMLAGSELDVIGIIGIILLIGIVKKNAILMIDFALSAEREQGLAPREAIYQACLLRLRPILMTTLAAMLGALPLMLGTGVGAELRQPLGLAMVGGLLFSQMLTLFTTPVIYLAFDRLARRFQTSRSAAEPA*