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scnpilot_p_inoc_scaffold_2380

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2380_1
RBG_16_Gammaproteobacteria_62_13__curated, Gammaproteobacteria, Proteobacteria, Bacteria

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49..747
DNA (699bp) protein (233aa)
two comoponent transcriptional regulator; K07662 two-component system, OmpR family, response regulator CpxR id=12493013 bin=THIO_HI species=Nitrosococcus oceani genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
two comoponent transcriptional regulator; K07662 two-component system, OmpR family, response regulator CpxR Tax=RBG_16_Gammaproteobacteria_62_13__curated
two comoponent transcriptional regulator
scnpilot_p_inoc_scaffold_2380_2
Nitrosospira lacus, Nitrosospira, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

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747..2159
DNA (1413bp) protein (471aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae
Signal transduction histidine kinase id=12493014 bin=THIO_HI species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Signal transduction histidine kinase
scnpilot_p_inoc_scaffold_2380_3
Ralstonia pickettii, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2161..3396
DNA (1236bp) protein (412aa)
acrA1; cation/multidrug efflux system, mebrane-fusion component AcrA; K07799 putative multidrug efflux transporter MdtA id=12493015 bin=THIO_HI species=Curvibacter lanceolatus genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
RND transporter MFP subunit
RND transporter MFP subunit {ECO:0000313|EMBL:AGW88962.1}; TaxID=1366050 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia picket
scnpilot_p_inoc_scaffold_2380_4
Asticcacaulis sp. AC466, Asticcacaulis, Caulobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

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3498..3761
DNA (264bp) protein (88aa)
hypothetical protein id=12493016 bin=THIO_HI species=Pseudomonas nitroreducens genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:ESQ84105.1}; TaxID=1282362 species="Bacteria; Proteobacteria; Alphaproteobacteria; Caulobacterales; Caulobacteraceae; Asticcacaulis.;" source="Asticcacaulis s
hypothetical protein
scnpilot_p_inoc_scaffold_2380_5
Herbaspirillum sp. GW103, Herbaspirillum, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3758..6835
DNA (3078bp) protein (1026aa)
cation/multidrug efflux pump transmembrane protein; K07788 RND superfamily, multidrug transport protein MdtB id=12493017 bin=THIO_HI species=Herbaspirillum seropedicae genus=Herbaspirillum taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Cation/multidrug efflux pump transmembrane protein {ECO:0000313|EMBL:EIJ46733.1}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum
cation/multidrug efflux pump transmembrane protein
scnpilot_p_inoc_scaffold_2380_6
blood disease bacterium R229, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6832..9927
DNA (3096bp) protein (1032aa)
mdtC; multidrug efflux system, subunit c; K07789 RND superfamily, multidrug transport protein MdtC id=12493969 bin=THIO_HI species=blood disease bacterium R229 genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
mdtC; multidrug efflux system, subunit C
Multidrug efflux system, subunit C {ECO:0000313|EMBL:CCA81820.1}; TaxID=741978 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="blood dise
scnpilot_p_inoc_scaffold_2380_7
Ralstonia solanacearum, Ralstonia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9939..11354
DNA (1416bp) protein (472aa)
outer membrane chanel lipoprotein transmembrane id=12493970 bin=THIO_HI species=Ralstonia solanacearum genus=Ralstonia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
putative outer membrane chanel lipoprotein transmembrane
Type I secretion outer membrane protein {ECO:0000313|EMBL:EAP74811.1}; TaxID=342110 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralst
scnpilot_p_inoc_scaffold_2380_8
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(11332..12063)
DNA (732bp) protein (244aa)
periplasmic or secreted lipoprotein id=12493971 bin=THIO_HI species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
periplasmic or secreted lipoprotein Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
periplasmic or secreted lipoprotein
scnpilot_p_inoc_scaffold_2380_9
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated, Hydrogenophilales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(12174..12995)
DNA (822bp) protein (274aa)
Ni-Fe hydrogenase large chain (EC:1.12.99.6); K06281 hydrogenase large subunit [EC:1.12.99.6] id=12493972 bin=THIO_HI species=Thiobacillus thioparus genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Ni-Fe hydrogenase large chain (EC:1.12.99.6); K06281 hydrogenase large subunit [EC:1.12.99.6] Tax=RIFOXYD1_FULL_Hydrogenophilales_62_11_curated
Ni-Fe hydrogenase large chain (EC:1.12.99.6)
Displaying 9 items

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