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scnpilot_p_inoc_scaffold_3114_12

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: 8921..10078

Top 3 Functional Annotations

Value Algorithm Source
Secretion protein HlyD {ECO:0000313|EMBL:GAO22083.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. similarity UNIPROT
DB: UniProtKB
  • Identity: 50.7
  • Coverage: 367.0
  • Bit_score: 338
  • Evalue 1.40e-89
Efflux transporter, RND family, MFP subunit id=1332410 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb similarity UNIREF
DB: UNIREF100
  • Identity: 46.7
  • Coverage: 403.0
  • Bit_score: 329
  • Evalue 4.60e-87
secretion protein HlyD similarity KEGG
DB: KEGG
  • Identity: 46.4
  • Coverage: 360.0
  • Bit_score: 303
  • Evalue 1.00e-79

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1158
ATGAGATTGAAAGTCCTGACAAGACCAGGTTGCGTCATCCTGTCCTTCGCGCTGCTTGCTGCCTGCGGTGGCCAAGACGACACGGCAAAGCACCCGGCCCCCGCGGCCAAACAAACGCATCCACTCGCGCTATCCGCGGACGAAATACGTAACGCGGGAATCAGCGTCGAAGTCGTGCAAGCACAACGCCAGAGCGAAACGCTCAGGCTGACGGGAACGATCGTTCCAGACCAAACGCGAATTGCAAAGATTCTGCCGATGTTGTCAGGCCGCATCGTATCGGTTCGGGTCAGCCAGGGCGACCCTGTCGATAGCGGTCAGAGCCTGGCAGTCCTGGAAAGCGCGGATCTGGGCGAAGCCCGGGCCGCCTTCCGCCAGGCGAAGAGCGAGGCCTCCCTGGCCGATGCCGCACTGGACCGGGCGCAACAGCTTACGGTGGATGACATCATCCCGAAGAAAGACTTTTTGCGGGCCAAGGCGGATGCTGAGCGGGCGCACGCCGCGCTGGATGCCGCAGCTGCCAAACTTCGGCTGTTCCACGTCTCGCCCGAAAACGATGGTGAGCGCGCAAAGGATCCGATTTATCCCCTGGTGGCGCCATTCTCCGGAACGATCATCGACCAAAAGGCCGTTCGCGGGGAACTCGCGCAACTCGACCAGTCACTGTTTACCCTTGCCGATTTGCGAACCGTATGGGTCGAGGCCGATGTTTTCGAGAAAGACCTTTCCGCGATTGCGACCGGCATGCCGGCACGCATCACTGTTGCCGCCTACCCGGACAGGGAGTTCGAAGGAGCGGTGCAGTATCTCGGCGACACCATGGACATTACGACACGCACCATCAAGGCGCGCATTGCGGTACGCAACCCGGAGCGAAAACTCAAGGCGGGGATGTTCGCCACCGTGATGCTCGATGCCGGATCGGCGACCGAGGCGCTCATCGTGCCCGAGCAGGCGGTGTCGATGATCCAGGGGCAATCGGCAGTGTTCGTTGAAGACGGCCAAGGCTTCGATGTCCGCGTCGTAGAGACGGAGGCCATGGGTGGAGGGAGGGTACGCATCAAGACGGGCCTTTCAGCAGGCGAGCGCATTGCCGTATCCGGGATCTACGAGCTCAAGGCCAGATTGCTCAAGTCCCAGATCGGCGGCGACGACTGA
PROTEIN sequence
Length: 386
MRLKVLTRPGCVILSFALLAACGGQDDTAKHPAPAAKQTHPLALSADEIRNAGISVEVVQAQRQSETLRLTGTIVPDQTRIAKILPMLSGRIVSVRVSQGDPVDSGQSLAVLESADLGEARAAFRQAKSEASLADAALDRAQQLTVDDIIPKKDFLRAKADAERAHAALDAAAAKLRLFHVSPENDGERAKDPIYPLVAPFSGTIIDQKAVRGELAQLDQSLFTLADLRTVWVEADVFEKDLSAIATGMPARITVAAYPDREFEGAVQYLGDTMDITTRTIKARIAVRNPERKLKAGMFATVMLDAGSATEALIVPEQAVSMIQGQSAVFVEDGQGFDVRVVETEAMGGGRVRIKTGLSAGERIAVSGIYELKARLLKSQIGGDD*