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scnpilot_p_inoc_scaffold_3114

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3114_1
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(3..242)
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Pseudomonas aeruginosa BWHPSA011 RepID=U8V8V4_PSEAI
Uncharacterized protein {ECO:0000313|EMBL:EPZ16306.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
hypothetical protein
scnpilot_p_inoc_scaffold_3114_2
unknown

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comp(437..682)
DNA (246bp) protein (82aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3114_3
Thauera phenylacetica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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714..992
DNA (279bp) protein (93aa)
hypothetical protein n=1 Tax=Ideonella sp. B508-1 RepID=UPI00034C5D8E
Uncharacterized protein {ECO:0000313|EMBL:ENO97989.1}; TaxID=1234382 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera phenylacetica B4P.
hypothetical protein
scnpilot_p_inoc_scaffold_3114_4
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

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1001..1984
DNA (984bp) protein (328aa)
cation diffusion facilitator family transporter id=12495454 bin=THIO_HI species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria rbh
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:ENO82004.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Tha
cation diffusion facilitator family transporter
scnpilot_p_inoc_scaffold_3114_5
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1981..2298
DNA (318bp) protein (106aa)
hypothetical protein; K09771 hypothetical protein id=12495455 bin=THIO_HI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
UPF0060 membrane protein Y695_00958 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="H
hypothetical protein
scnpilot_p_inoc_scaffold_3114_6
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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2354..3049
DNA (696bp) protein (232aa)
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00036F84F0
Transcriptional activator protein czcR {ECO:0000313|EMBL:CDQ12289.1}; TaxID=160808 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.
two component heavy metal response winged helix family transcriptional regulator
scnpilot_p_inoc_scaffold_3114_7
Acidithiobacillus ferrivorans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

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3009..4442
DNA (1434bp) protein (478aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=743299 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacil
hypothetical protein n=1 Tax=Oxalobacteraceae bacterium AB_14 RepID=UPI00037F7CA9
heavy metal sensor signal transduction histidine kinase
scnpilot_p_inoc_scaffold_3114_8
Thioalkalivibrio thiocyanoxidans, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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4717..5118
DNA (402bp) protein (134aa)
GtrA family protein n=1 Tax=Thioalkalivibrio thiocyanoxidans ARh 4 RepID=G4DLM2_9GAMM
polysaccharide synthesis protein GtrA
Polysaccharide synthesis protein GtrA {ECO:0000313|EMBL:AHE97810.1}; TaxID=713587 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" sour
scnpilot_p_inoc_scaffold_3114_9
Herminiimonas arsenicoxydans, Herminiimonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5118..6128
DNA (1011bp) protein (337aa)
CPS-53 (KpLE1) prophage; bactoprenol glucosyl transferase (EC:2.4.1.83)
Glycosyl transferase, family 2 {ECO:0000313|EMBL:CAL61765.1}; EC=2.4.1.- {ECO:0000313|EMBL:CAL61765.1};; TaxID=204773 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacte
Glycosyl transferase, family 2 n=1 Tax=Herminiimonas arsenicoxydans RepID=A4G5H8_HERAR rbh
scnpilot_p_inoc_scaffold_3114_10
Methylovorus glucosotrophus, Methylovorus, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

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6125..7612
DNA (1488bp) protein (496aa)
Glycosyl transferase family 39 n=1 Tax=Methylovorus sp. (strain SIP3-4) RepID=C6XBG7_METSD rbh
glycosyl transferase family protein rbh
Glycosyl transferase family 39 {ECO:0000313|EMBL:ACT51937.1}; TaxID=582744 species="Bacteria; Proteobacteria; Betaproteobacteria; Methylophilales; Methylophilaceae; Methylovorus.;" source="Methylovoru
scnpilot_p_inoc_scaffold_3114_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7621..8559
DNA (939bp) protein (313aa)
Outer membrane efflux protein n=1 Tax=Gallionella capsiferriformans (strain ES-2) RepID=D9SIM8_GALCS
Outer membrane efflux protein {ECO:0000313|EMBL:GAO22084.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
outer membrane efflux protein
scnpilot_p_inoc_scaffold_3114_12
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8921..10078
DNA (1158bp) protein (386aa)
Secretion protein HlyD {ECO:0000313|EMBL:GAO22083.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp.
Efflux transporter, RND family, MFP subunit id=1332410 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
secretion protein HlyD
scnpilot_p_inoc_scaffold_3114_13
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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10088..10465
DNA (378bp) protein (126aa)
CzcA family heavy metal efflux pump {ECO:0000313|EMBL:GAO22082.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicy
Heavy metal efflux pump, CzcA family id=1332409 bin=GWE1_T_denit_62_9 species=Gallionella capsiferriformans genus=Gallionella taxon_order=Gallionellales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWE1_T_denit_62_9 organism_group=Betaproteobacteria organism_desc=exp 2.9 Mb
heavy metal efflux pump CzcA
Displaying 13 items

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