ggKbase home page

scnpilot_p_inoc_scaffold_8045_5

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: comp(2318..3793)

Top 3 Functional Annotations

Value Algorithm Source
ribulose-bisphosphate carboxylase (EC:4.1.1.39); K01601 ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39] id=12493632 bin=THIO_HI species=Nitrosococcus halophilus genus=Nitrosococcus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 492.0
  • Bit_score: 1001
  • Evalue 2.70e-289
  • rbh
ribulose-bisphosphate carboxylase (EC:4.1.1.39) similarity KEGG
DB: KEGG
  • Identity: 92.8
  • Coverage: 489.0
  • Bit_score: 942
  • Evalue 4.10e-272
Ribulose bisphosphate carboxylase large chain {ECO:0000256|HAMAP-Rule:MF_01338}; Short=RuBisCO large subunit {ECO:0000256|HAMAP-Rule:MF_01338};; EC=4.1.1.39 {ECO:0000256|HAMAP-Rule:MF_01338};; TaxID=4 similarity UNIPROT
DB: UniProtKB
  • Identity: 92.8
  • Coverage: 489.0
  • Bit_score: 942
  • Evalue 2.10e-271

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Nitrosococcus halophilus → Nitrosococcus → Chromatiales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1476
ATGGCATCGCAAACTATCAAGGAAGGCAAGGAACGTTACAAGTCGGGTGTGATTCCGTACAAGAAGATGGGCTACTGGGAACCGGATTACAAGCCCAAGGATACTGACGTGATCGCGCTGTTCCGCATCACCCCGCAGGAAGGCGTCGACCCCGAAGAAGCCGCTGCCGCCGTCGCGGGAGAATCGTCGACCGCGACGTGGACGGTGGTGTGGACCGACCGCCTGACCGCCTGCGAGCTTTATCGCGCCAAGGCGTATCGCGTGGATCCTGTCCCCAATACCGGTGCCGGCACCAAGAACGAAGCGCAGTATTTCGCCTATATCGCCTATGACCTCGACCTCTTCGAGCCGGGTTCGATCGCCAACCTGACCGCGTCGATCATCGGCAACGTGTTCGGCTTCAAGGCGGTGAAGGCACTGCGCCTCGAAGACATGCGCATTCCCGTCGCCTATCTGAAGACCTTCCAGGGCCCGGCAACCGGCATCGTGGTCGAGCGCGAGCGCCTCGACAAATTCGGCCGCCCCCTGCTGGGCGCCACCACCAAACCCAAGCTCGGGTTGTCGGGCCGCAACTACGGCCGCGTGGTGTACGAAGCATTGAAAGGCGGCCTCGACTTCGTGAAGGACGACGAGAACATCAACTCGCAGCCCTTCATGCACTGGCGCGACCGTTTCCTGTATTGCATGGAAGCGGTGAACAAGGCCTCGGCCGCTACCGGCGAAGTCAAGGGTCATTACCTCAACGTCACCGCCGGCACCATGGAGGAGATGTACGAACGCGCCGAATTCGCCAGGAACCTGGGATCGGTGATTGTCATGATCGACCTGGTCATCGGCTATACCGCGATCCAGAGCATGGCGAAATGGGCGCGCAAGAACGACATGATCCTGCACCTGCACCGCGCCGGAAACTCGACCTACTCACGTCAGAAGAATCACGGCATGAATTTCCGCGTGATCTGCAAATGGATGCGCATGGCGGGCGTCGATCACATTCATGCCGGCACCGTCGTGGGCAAGCTCGAGGGCGATCCGCTGATGATCAAGGGCTTCTATGACACCCTGCGGGACACGCATACGCCGATGAGCCTGGAAAACGGCCTGTTCTTCGACCAGGACTGGGCTTCGCTCAACAAGGTCATGCCGGTCGCTTCCGGCGGCATTCACGCAGGCCAGATGCACCAGTTGCTGACCTATCTCGGCGAAGACGTGATCCTGCAGTTCGGCGGCGGCACCATCGGCCACCCGCAGGGTATCCAGGCCGGCGCCACGGCGAATCGCGTGGCACTTGAAGCGATGGTGATGGCGCGCAACGAGGGCCGCGACATCTGGAACGAAGGGCCGCAGATTCTGGAGGCCGCAGCCAAATGGTGCACGCCGCTCAGGGCTGCCCTCGACACGTGGAAGGACATCACCTTCAACTACGCGTCGACCGATACCGCCGATTTTGTGCCCACCGCTACGGCCAGCGTTTGA
PROTEIN sequence
Length: 492
MASQTIKEGKERYKSGVIPYKKMGYWEPDYKPKDTDVIALFRITPQEGVDPEEAAAAVAGESSTATWTVVWTDRLTACELYRAKAYRVDPVPNTGAGTKNEAQYFAYIAYDLDLFEPGSIANLTASIIGNVFGFKAVKALRLEDMRIPVAYLKTFQGPATGIVVERERLDKFGRPLLGATTKPKLGLSGRNYGRVVYEALKGGLDFVKDDENINSQPFMHWRDRFLYCMEAVNKASAATGEVKGHYLNVTAGTMEEMYERAEFARNLGSVIVMIDLVIGYTAIQSMAKWARKNDMILHLHRAGNSTYSRQKNHGMNFRVICKWMRMAGVDHIHAGTVVGKLEGDPLMIKGFYDTLRDTHTPMSLENGLFFDQDWASLNKVMPVASGGIHAGQMHQLLTYLGEDVILQFGGGTIGHPQGIQAGATANRVALEAMVMARNEGRDIWNEGPQILEAAAKWCTPLRAALDTWKDITFNYASTDTADFVPTATASV*