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scnpilot_p_inoc_scaffold_8045_6

Organism: SCNpilot_P_inoc_Thiobacillus_63_16_multi

partial RP 38 / 55 MC: 1 BSCG 35 / 51 ASCG 9 / 38 MC: 2
Location: 3968..4870

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator id=12493633 bin=THIO_HI species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 301.0
  • Bit_score: 587
  • Evalue 7.30e-165
  • rbh
RuBisCO operon transcriptional regulator {ECO:0000313|EMBL:CCU61628.1}; TaxID=1288494 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 77.1
  • Coverage: 297.0
  • Bit_score: 460
  • Evalue 1.40e-126
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 75.5
  • Coverage: 294.0
  • Bit_score: 443
  • Evalue 6.30e-122

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Taxonomy

Nitrosospira lacus → Nitrosospira → Nitrosomonadales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 903
ATGCGTCACAGTACCTTGCGACAACTGGAAGTATTCTCGACCATTGCCCGTCTGGGCAGCTTTACCCGTGCGGCGGAAGAGCTTTTTCTGACCCAGCCGACCGTCTCGATGCAGATCAAGAAACTGACGGACGCCGTGGGTCTCCCGCTGTTCGAACAGATCGGCAAAAAGATGTACCTCACCGACGCCGGCCGCGAGCTGCAGCAGACCTGCGACGGCATCTTCGAGCACTTTTCCCGCTTCGAGATGGCCATCGCCGACATGAAAGGGCTCAAGAAGGGCACCCTTAAACTTGCCGTCGTCACCACCGCGAAATATTTCGCACCGCGCCTGCTGGGGCCGTTCTGCCAGGCGCATTCGGGGGTCGACGTGTCGCTCAAGGTCTCGAACCGTGAGCGGGTGCTCGAACGGCTGGCCGGCAACCAGGACGATCTGTACATCCTGGGCCAGCCGCCGGAAGACATCGACGCGATGGCCGAACCTTTTCTGGAAAATCTGCTGGTCGTGCTGGCGCCCGCGAGCCACCCGCTCGCGAAAGACAGGAACATTCCGCTGTCGCGCCTCGCCAAGGAACCGTTTCTGGTGCGCGAGCCCGGCTCCGGCACGCGCGCGGCAGTGGAAAGACTGTTCGCGTCGAAAAAGATCATCCCGAAGGTGCGCATGGAACTCGGAAGCAACGAGGCCATCAAGCAGGCCATCGTGGGCGGCCTGGGCATTTCGGTGCTCTCGCGTCACACCCTCTCGCTGGATGCGCCGCTGGGCCACATCGCCATTCTCGACGTGGAGAATTTTCCGATCAGACGGCATTGGTATGTCGCCTATCCGCGTGGCAAAAAACTTTCGGTGATCGCGCAGGCGTTTCTCGAATATCTGAAACAGGCGCCGAAACTGACCCCGATGTAG
PROTEIN sequence
Length: 301
MRHSTLRQLEVFSTIARLGSFTRAAEELFLTQPTVSMQIKKLTDAVGLPLFEQIGKKMYLTDAGRELQQTCDGIFEHFSRFEMAIADMKGLKKGTLKLAVVTTAKYFAPRLLGPFCQAHSGVDVSLKVSNRERVLERLAGNQDDLYILGQPPEDIDAMAEPFLENLLVVLAPASHPLAKDRNIPLSRLAKEPFLVREPGSGTRAAVERLFASKKIIPKVRMELGSNEAIKQAIVGGLGISVLSRHTLSLDAPLGHIAILDVENFPIRRHWYVAYPRGKKLSVIAQAFLEYLKQAPKLTPM*