Consensus taxonomy: Hydrogenophilales → Betaproteobacteria → Proteobacteria → Bacteria
fragmented, some high-coverage core genes included.
contig | # features | sequence size | GC content (%) | Cov | Coding Density (%) | |
---|---|---|---|---|---|---|
scnpilot_p_inoc_scaffold_18051
Genus:
Thauera (50%)
|
8 | 4557 bp | 71.69 | 6.29 | 98.49 | |
scnpilot_p_inoc_scaffold_11130
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (75%)
|
4 | 4345 bp | 67.69 | 14.33 | 95.70 | |
scnpilot_p_inoc_scaffold_12193
Species:
GWE1_Thiobacillus_62_9_curated (60%)
|
5 | 4074 bp | 67.45 | 49.26 | 96.10 | |
scnpilot_p_inoc_scaffold_9336
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
|
6 | 4918 bp | 67.24 | 9.70 | 100.65 | |
scnpilot_p_inoc_scaffold_9075
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (80%)
|
5 | 5027 bp | 66.94 | 13.28 | 97.87 | |
scnpilot_p_inoc_scaffold_11188
Class:
Betaproteobacteria (100%)
|
5 | 4330 bp | 66.93 | 10.25 | 91.32 | |
scnpilot_p_inoc_scaffold_5692
Class:
Betaproteobacteria (62.5%)
|
8 | 6955 bp | 66.93 | 11.02 | 97.44 | |
scnpilot_p_inoc_scaffold_6934
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (75%)
|
4 | 6054 bp | 66.88 | 13.97 | 96.48 | |
scnpilot_p_inoc_scaffold_3802
Class:
Betaproteobacteria (72.73%)
|
11 | 9107 bp | 66.76 | 8.38 | 85.55 | |
scnpilot_p_inoc_scaffold_2876
Phylum:
Proteobacteria (77.78%)
|
9 | 11126 bp | 66.75 | 6.12 | 96.56 | |
scnpilot_p_inoc_scaffold_10141
Order:
Hydrogenophilales (50%)
|
6 | 4653 bp | 66.54 | 9.51 | 93.17 | |
scnpilot_p_inoc_scaffold_2380
Class:
Betaproteobacteria (77.78%)
|
9 | 12995 bp | 66.33 | 8.78 | 98.16 | |
scnpilot_p_inoc_scaffold_11346
Species:
GWE1_Thiobacillus_62_9_curated (60%)
|
5 | 4287 bp | 66.25 | 8.54 | 97.97 | |
scnpilot_p_inoc_scaffold_8151
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
|
6 | 5407 bp | 66.21 | 18.64 | 93.32 | |
scnpilot_p_inoc_scaffold_10719
Species:
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (66.67%)
|
3 | 5035 bp | 66.16 | 13.17 | 97.95 | |
scnpilot_p_inoc_scaffold_10528
Class:
Betaproteobacteria (50%)
|
4 | 4528 bp | 66.10 | 27.99 | 88.71 | |
scnpilot_p_inoc_scaffold_9072
Order:
Hydrogenophilales (100%)
|
3 | 5028 bp | 66.09 | 11.01 | 90.75 | |
scnpilot_p_inoc_scaffold_4123
Order:
Hydrogenophilales (66.67%)
|
6 | 8626 bp | 66.07 | 8.68 | 97.48 | |
scnpilot_p_inoc_scaffold_9979
Species:
GWE1_Thiobacillus_62_9_curated (60%)
|
5 | 4710 bp | 65.99 | 11.27 | 94.46 | |
scnpilot_p_inoc_scaffold_7258
Species:
Thiobacillus denitrificans (66.67%)
|
6 | 5876 bp | 65.98 | 51.08 | 93.94 | |
scnpilot_p_inoc_scaffold_11006
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (60%)
|
5 | 4382 bp | 65.97 | 10.24 | 93.18 | |
scnpilot_p_inoc_scaffold_5408
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
6 | 7208 bp | 65.91 | 12.03 | 97.68 | |
scnpilot_p_inoc_scaffold_11489
Species:
Thiobacillus denitrificans (50%)
|
4 | 4247 bp | 65.88 | 8.48 | 93.45 | |
scnpilot_p_inoc_scaffold_11719
Species:
GWE1_Thiobacillus_62_9_curated (66.67%)
|
3 | 4187 bp | 65.82 | 8.88 | 97.80 | |
scnpilot_p_inoc_scaffold_7654
Order:
Hydrogenophilales (100%)
|
6 | 5671 bp | 65.74 | 12.83 | 92.84 | |
scnpilot_p_inoc_scaffold_12158
Order:
Hydrogenophilales (100%)
|
5 | 4085 bp | 65.73 | 12.63 | 97.23 | |
scnpilot_p_inoc_scaffold_6675
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (50%)
|
6 | 6224 bp | 65.73 | 10.60 | 96.59 | |
scnpilot_p_inoc_scaffold_6085
Species:
Thiobacillus denitrificans (50%)
|
6 | 6634 bp | 65.72 | 11.51 | 94.51 | |
scnpilot_p_inoc_scaffold_1198
Species:
Acidovorax sp. JS42 (66.67%)
|
27 | 25180 bp | 65.71 | 13.67 | 87.74 | |
scnpilot_p_inoc_scaffold_7104
Genus:
Rubrivivax (50%)
|
8 | 5959 bp | 65.68 | 16.61 | 94.55 | |
scnpilot_p_inoc_scaffold_4255
Order:
Hydrogenophilales (100%)
|
9 | 8459 bp | 65.66 | 22.82 | 94.98 | |
scnpilot_p_inoc_scaffold_3075
Order:
Hydrogenophilales (100%)
|
14 | 10575 bp | 65.60 | 11.35 | 96.03 | |
scnpilot_p_inoc_scaffold_1502
Order:
Hydrogenophilales (87.5%)
|
16 | 19796 bp | 65.43 | 22.16 | 94.35 | |
scnpilot_p_inoc_scaffold_3818
Order:
Hydrogenophilales (77.78%)
|
9 | 9072 bp | 65.38 | 37.78 | 92.56 | |
scnpilot_p_inoc_scaffold_9968
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
4 | 4712 bp | 65.34 | 10.51 | 94.42 | |
scnpilot_p_inoc_scaffold_2435
Order:
Hydrogenophilales (100%)
|
13 | 12760 bp | 65.33 | 25.64 | 95.34 | |
scnpilot_p_inoc_scaffold_8855
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (66.67%)
|
6 | 5116 bp | 65.27 | 10.03 | 90.83 | |
scnpilot_p_inoc_scaffold_11032
Order:
Hydrogenophilales (87.5%)
|
8 | 4376 bp | 65.27 | 9.91 | 87.61 | |
scnpilot_p_inoc_scaffold_10474
Species:
RIFOXYD1_FULL_Hydrogenophilales_62_11_curated (100%)
|
3 | 4548 bp | 65.26 | 8.51 | 93.01 | |
scnpilot_p_inoc_scaffold_11914
Order:
Hydrogenophilales (100%)
|
6 | 4142 bp | 65.23 | 11.37 | 92.85 | |
scnpilot_p_inoc_scaffold_25454 | 3 | 4025 bp | 65.22 | 64.25 | 88.62 | |
scnpilot_p_inoc_scaffold_3022
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (77.78%)
|
9 | 10688 bp | 65.21 | 24.14 | 91.45 | |
scnpilot_p_inoc_scaffold_4061
Species:
GWE1_Thiobacillus_62_9_curated (57.14%)
|
7 | 8704 bp | 65.21 | 17.89 | 98.51 | |
scnpilot_p_inoc_scaffold_6219
Order:
Hydrogenophilales (55.56%)
|
9 | 6530 bp | 65.19 | 10.22 | 101.62 | |
scnpilot_p_inoc_scaffold_10647
Order:
Hydrogenophilales (80%)
|
5 | 4492 bp | 65.12 | 8.85 | 94.57 | |
scnpilot_p_inoc_scaffold_4271
Order:
Hydrogenophilales (77.78%)
|
9 | 8440 bp | 65.11 | 52.50 | 92.81 | |
scnpilot_p_inoc_scaffold_9160
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (60%)
|
5 | 5361 bp | 65.10 | 14.77 | 99.27 | |
scnpilot_p_inoc_scaffold_5919
Species:
RIFOXYA1_FULL_Hydrogenophilales_63_33_curated (70%)
|
10 | 6762 bp | 64.97 | 14.82 | 85.23 | |
scnpilot_p_inoc_scaffold_1556
Species:
GWE1_Thiobacillus_62_9_curated (50%)
|
14 | 19066 bp | 64.95 | 10.83 | 92.44 | |
scnpilot_p_inoc_scaffold_1548
Species:
Acidovorax sp. JS42 (65.38%)
|
26 | 19216 bp | 64.94 | 14.53 | 92.89 |