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scnpilot_p_inoc_scaffold_474

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_474_1
unknown

Not on your lists

2..175
DNA (174bp) protein (58aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_474_2

Not on your lists

comp(290..1012)
DNA (723bp) protein (241aa)
hypothetical protein n=1 Tax=Cytophaga aurantiaca RepID=UPI00036D6E2C rbh
Marine sediment metagenome DNA, contig: S01H4_S07119 {ECO:0000313|EMBL:GAG94054.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
scnpilot_p_inoc_scaffold_474_3
Pontibacter korlensis, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(1135..2331)
DNA (1197bp) protein (399aa)
tuf; elongation factor Tu (EC:3.6.5.3)
elongation factor Tu n=1 Tax=Dyadobacter beijingensis RepID=UPI00037B8279
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=400092 species="Bacteria; Bacteroidetes; Cytophagia; Cytoph
scnpilot_p_inoc_scaffold_474_4
unknown

Not on your lists

comp(2496..2702)
DNA (207bp) protein (69aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_474_5
unknown

Not on your lists

comp(2992..3195)
DNA (204bp) protein (68aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_474_6
Cecembia lonarensis, Cecembia, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3292..3597
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Cecembia lonarensis LW9 RepID=K1LJQ1_9BACT
ribosomal subunit interface protein
Uncharacterized protein {ECO:0000313|EMBL:EKB50553.1}; TaxID=1225176 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Cecembia.;" source="Cecembia lonarensis LW9.;"
scnpilot_p_inoc_scaffold_474_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

4121..5086
DNA (966bp) protein (322aa)
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase n=1 Tax=Pontibacter sp. BAB1700 RepID=J1FKP1_9BACT rbh
TIM-barrel fold metal-dependent hydrolase Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
2-amino-3-carboxymuconate-6-semialdehyde decarboxylase
scnpilot_p_inoc_scaffold_474_8
Hassallia byssoidea, Hassallia, Nostocales, Cyanobacteria, Bacteria

Not on your lists

5174..6436
DNA (1263bp) protein (421aa)
fumarylacetoacetate hydrolase (EC:3.7.1.2)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI000345DDD6
Fumarylacetoacetase {ECO:0000313|EMBL:KIF30641.1}; TaxID=1304833 species="Bacteria; Cyanobacteria; Nostocales; Microchaetaceae; Hassallia.;" source="Hassallia byssoidea VB512170.;"
scnpilot_p_inoc_scaffold_474_9
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

6506..8779
DNA (2274bp) protein (758aa)
Two component regulator propeller n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TMI4_NIAKG
Two component regulator propeller
Two component regulator propeller {ECO:0000313|EMBL:AEW01972.1}; Flags: Precursor;; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;"
scnpilot_p_inoc_scaffold_474_10
Pontibacter sp. BAB1700, Pontibacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8789..9274
DNA (486bp) protein (162aa)
hypothetical protein n=1 Tax=Nafulsella turpanensis RepID=UPI00034C69ED
Phenylacetate-CoA oxygenase, paaj subunit {ECO:0000313|EMBL:EJF11037.1}; TaxID=1144253 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Pontibacter.;" source="Pontibacter sp.
phenylacetate-CoA oxygenase, paaj subunit
scnpilot_p_inoc_scaffold_474_11
Mycobacterium tuberculosis, Mycobacterium, Corynebacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9267..11165)
DNA (1899bp) protein (633aa)
Uncharacterized protein n=5 Tax=Mycobacterium tuberculosis RepID=M9UUH2_MYCTU rbh
hypothetical protein
Serine esterase {ECO:0000313|EMBL:AIH42108.1}; TaxID=1773 species="Bacteria; Actinobacteria; Corynebacteriales; Mycobacteriaceae; Mycobacterium; Mycobacterium tuberculosis complex.;" source="Mycobacte
scnpilot_p_inoc_scaffold_474_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11366..12685)
DNA (1320bp) protein (440aa)
ABC transporter, permease protein, putative n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6V5_DYAFD
ABC transporter permease
ABC transporter, permease protein, putative {ECO:0000313|EMBL:ACT96166.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" sou
scnpilot_p_inoc_scaffold_474_13
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12682..13587)
DNA (906bp) protein (302aa)
ABC transporter related n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PVA3_CHIPD
ABC transporter
ABC transporter related {ECO:0000313|EMBL:ACU64696.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_p_inoc_scaffold_474_14
RIFOXYD2_FULL_Sphingobacteria_35_12_curated, Sphingobacteria, Bacteroidetes, Bacteria

Not on your lists

comp(13616..14335)
DNA (720bp) protein (240aa)
pseudouridine synthase; K06180 23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23] Tax=RIFOXYD2_FULL_Sphingobacteria_35_12_curated
Pseudouridine synthase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TRT0_NIAKG
pseudouridine synthase
scnpilot_p_inoc_scaffold_474_15
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14332..14592)
DNA (261bp) protein (87aa)
Smr protein/MutS2 id=2477776 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
Smr protein/MutS2 Tax=GWA2_Bacteroidetes_32_17_curated
Smr protein/MutS2
scnpilot_p_inoc_scaffold_474_16
Campylobacter hyointestinalis, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14606..15106)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KEA43940.1}; TaxID=91352 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campylobact
cation diffusion facilitator family transporter id=4379147 bin=GWA2_Bacteroidetes_A19_40_15 species=Anaerophaga thermohalophila genus=Anaerophaga taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWA2_Bacteroidetes_A19_40_15 organism_group=Bacteroidetes
cation diffusion facilitator family transporter
scnpilot_p_inoc_scaffold_474_17
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15278..15673)
DNA (396bp) protein (132aa)
Protein translocase, SecG subunit n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMX9_SOLCM
protein translocase subunit SecG
Protein translocase, SecG subunit {ECO:0000313|EMBL:AFD09058.1}; Flags: Precursor;; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.
scnpilot_p_inoc_scaffold_474_18
Solitalea canadensis, Solitalea, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15678..16565)
DNA (888bp) protein (296aa)
Uncharacterized protein n=1 Tax=Solitalea canadensis (strain ATCC 29591 / DSM 3403 / NBRC 15130 / NCIMB 12057 / USAM 9D) RepID=H8KMY0_SOLCM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFD09059.1}; TaxID=929556 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Solitalea.;" source="Solitalea canadens
scnpilot_p_inoc_scaffold_474_19
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16636..17676)
DNA (1041bp) protein (347aa)
glycerol 3-phosphate dehydrogenase (nad(p)+) (EC:1.1.1.94)
Glycerol-3-phosphate dehydrogenase [NAD(P)+] {ECO:0000256|HAMAP-Rule:MF_00394}; EC=1.1.1.94 {ECO:0000256|HAMAP-Rule:MF_00394};; NAD(P)H-dependent glycerol-3-phosphate dehydrogenase {ECO:0000256|HAMAP-
Glycerol-3-phosphate dehydrogenase [NAD(P)+] n=1 Tax=Marivirga tractuosa (strain ATCC 23168 / DSM 4126 / NBRC 15989 / NCIMB 1408 / VKM B-1430 / H-43) RepID=E4TR71_MARTH rbh
scnpilot_p_inoc_scaffold_474_20
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17836..18306
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Lewinella cohaerens RepID=UPI00037B4555
transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105, ECO:0000256|SAAS:SAAS00018706}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1524460 species="Bacteri
scnpilot_p_inoc_scaffold_474_21
Geofilum rubicundum, Geofilum, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18329..18955)
DNA (627bp) protein (209aa)
Uridine kinase {ECO:0000256|RuleBase:RU003825, ECO:0000256|SAAS:SAAS00007563}; EC=2.7.1.48 {ECO:0000256|RuleBase:RU003825};; TaxID=1236989 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales;
uridine kinase (EC:2.7.1.48)
Uridine kinase id=4017034 bin=GWF2_Bacteroidetes_35_48 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_35_48 organism_group=Bacteroidetes organism_desc=a81
scnpilot_p_inoc_scaffold_474_22
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(19043..19864)
DNA (822bp) protein (274aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (EC:2.3.1.117)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase {ECO:0000313|EMBL:KHJ38479.1}; EC=2.3.1.117 {ECO:0000313|EMBL:KHJ38479.1};; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingoba
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase n=1 Tax=Pedobacter saltans (strain ATCC 51119 / DSM 12145 / JCM 21818 / LMG 10337 / NBRC 100064 / NCIMB 13643) RepID=F0SCH1_PEDSD rbh
scnpilot_p_inoc_scaffold_474_23
Alcanivorax dieselolei, Alcanivorax, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19996..20976
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Alcanivorax dieselolei (strain DSM 16502 / CGMCC 1.3690 / B-5) RepID=K0C621_ALCDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFT68899.1}; TaxID=930169 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; Alcanivoracaceae; Alcanivorax.;" source="Alcanivorax dies
scnpilot_p_inoc_scaffold_474_24
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21060..21470)
DNA (411bp) protein (137aa)
CBS domain protein n=1 Tax=Capnocytophaga sp. oral taxon 412 str. F0487 RepID=I9DYT6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:KGE89356.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylib
hypothetical protein
scnpilot_p_inoc_scaffold_474_25
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21542..22810
DNA (1269bp) protein (423aa)
Secreted protein containing DUF1343 id=4203925 bin=GWF2_Bacteroidetes_38_335 species=Zunongwangia profunda genus=Zunongwangia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
hypothetical protein
scnpilot_p_inoc_scaffold_474_26
RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated, Bacteroidetes, Bacteria

Not on your lists

22832..24556
DNA (1725bp) protein (575aa)
Collagen triple helix repeat-containing protein id=4991705 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_35_15_curated
Collagen triple helix repeat-containing protein
scnpilot_p_inoc_scaffold_474_27
unknown

Not on your lists

24577..24951
DNA (375bp) protein (125aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_474_28
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(24948..25427)
DNA (480bp) protein (160aa)
Response regulator receiver n=1 Tax=Methanosarcina barkeri (strain Fusaro / DSM 804) RepID=Q466R3_METBF
Two-component system response regulator
Response regulator receiver {ECO:0000313|EMBL:AAZ72129.1}; TaxID=269797 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcin
scnpilot_p_inoc_scaffold_474_29
GWE2_Bacteroidetes_29_8_curated, Bacteroidetes, Bacteria

Not on your lists

comp(25531..27039)
DNA (1509bp) protein (503aa)
Alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen id=3299401 bin=GWF2_Bacteroidetes_29_10 species=Fibrisoma limi genus=Fibrisoma taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes rbh
alkyl hydroperoxide reductase/thiol specific antioxidant/Mal allergen Tax=GWE2_Bacteroidetes_29_8_curated
thiol-disulfide isomerase
scnpilot_p_inoc_scaffold_474_30
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(27141..29195)
DNA (2055bp) protein (685aa)
outer membrane protein 3a Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
OmpA/MotB domain protein id=3972981 bin=GWF2_Bacteroidetes_29_10 species=Saprospira grandis genus=Saprospira taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_29_10 organism_group=Bacteroidetes rbh
hypothetical protein
Displaying items 1-30 of 67 in total

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