ggKbase home page

scnpilot_p_inoc_scaffold_1763

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1763_1
Pedobacter antarcticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(261..683)
DNA (423bp) protein (141aa)
cytochrome c class i (EC:1.7.2.1)
Cytochrome c class i n=1 Tax=Saprospira grandis (strain Lewin) RepID=H6KZF0_SAPGL
Copper oxidase {ECO:0000313|EMBL:KEQ28817.1}; TaxID=1358423 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter antarcticus 4B
scnpilot_p_inoc_scaffold_1763_2
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

905..3256
DNA (2352bp) protein (784aa)
DNA topoisomerase 1 {ECO:0000256|HAMAP-Rule:MF_00952}; EC=5.99.1.2 {ECO:0000256|HAMAP-Rule:MF_00952};; DNA topoisomerase I {ECO:0000256|HAMAP-Rule:MF_00952}; TaxID=485918 species="Bacteria; Bacteroide
DNA topoisomerase 1 n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PC68_CHIPD
DNA topoisomerase I
scnpilot_p_inoc_scaffold_1763_3
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3265..4128
DNA (864bp) protein (288aa)
Putative uncharacterized protein id=3735169 bin=GWF2_Bacteroidetes_33_38 species=Solitalea canadensis genus=Solitalea taxon_order=Sphingobacteriales taxon_class=Sphingobacteriia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1763_4
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4132..4692)
DNA (561bp) protein (187aa)
CMP/dCMP deaminase zinc-binding protein id=1767251 bin=GWE2_Bacteroidetes_42_42 species=Treponema caldaria genus=Treponema taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_p_inoc_scaffold_1763_5
Flavobacteriales bacterium BRH_c54, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(4700..5692)
DNA (993bp) protein (331aa)
3-oxoacyl-[acyl-carrier-protein] synthase 3 {ECO:0000256|HAMAP-Rule:MF_01815}; EC=2.3.1.180 {ECO:0000256|HAMAP-Rule:MF_01815};; 3-oxoacyl-[acyl-carrier-protein] synthase III {ECO:0000256|HAMAP-Rule:MF
3-oxoacyl-ACP synthase (EC:2.3.1.41)
3-oxoacyl-[acyl-carrier-protein] synthase 3 id=4064239 bin=GWF2_Bacteroidetes_41_31 species=Cesiribacter andamanensis genus=Cesiribacter taxon_order=Cytophagales taxon_class=Cytophagia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_31 organism_group=Bacteroidetes
scnpilot_p_inoc_scaffold_1763_6
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5776..5925)
DNA (150bp) protein (50aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EM50_RUNSL
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI50150.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2953
scnpilot_p_inoc_scaffold_1763_7
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5963..6985)
DNA (1023bp) protein (341aa)
Heptosyltransferase II id=4955375 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
glycosyl transferase family protein Tax=GWA2_Bacteroidetes_32_17_curated
glycosyl transferase
scnpilot_p_inoc_scaffold_1763_8
Saprospira grandis, Saprospira, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(7063..12927)
DNA (5865bp) protein (1955aa)
Uncharacterized protein n=1 Tax=Saprospira grandis DSM 2844 RepID=J0P935_9SPHI rbh
Uncharacterized protein {ECO:0000313|EMBL:EJF54082.1}; TaxID=694433 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Saprospira.;" source="Saprospira grandis DSM
hypothetical protein
scnpilot_p_inoc_scaffold_1763_9
Draconibacterium orientale, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13204..13401
DNA (198bp) protein (66aa)
Protein translocase subunit SecE n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / JCM 12287 / NRRL B-23963) RepID=G8R8P2_OWEHD
elongation factor Tu
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1168034 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconib
scnpilot_p_inoc_scaffold_1763_10
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13406..13939
DNA (534bp) protein (178aa)
transcription antitermination protein NusG n=1 Tax=Lewinella cohaerens RepID=UPI00035F2911
NusG antitermination factor
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteri
scnpilot_p_inoc_scaffold_1763_11
Phaeodactylibacter xiamenensis, Phaeodactylibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

14019..14618
DNA (600bp) protein (200aa)
Uncharacterized protein n=1 Tax=Acinetobacter sp. CIP 101934 RepID=N9N8G0_9GAMM
Acyltransferase {ECO:0000313|EMBL:KGE86664.1}; TaxID=1524460 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Phaeodactylibacter.;" source="Phaeodactylibacter xi
1-acyl-sn-glycerol-3-phosphate acyltransferase
scnpilot_p_inoc_scaffold_1763_12
unknown

Not on your lists

15070..15951
DNA (882bp) protein (294aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1763_13
unknown

Not on your lists

15980..16867
DNA (888bp) protein (296aa)

This feature has no annotations

Displaying 13 items

View Taxonomy