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scnpilot_p_inoc_scaffold_396

Search features with annotation key words

Displaying items 1-30 of 110 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_396_1
unknown

Not on your lists

217..327
-----------------
DNA (111bp)
protein (37aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_396_2
unknown

Not on your lists

827..1111
-----------------
DNA (285bp)
protein (95aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_396_3
Cyclobacteriaceae bacterium AK24, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1130..2368
-----------------
DNA (1239bp)
protein (413aa)
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein n=1 Tax=Cyclobacteriaceae bacterium AK24 RepID=R7ZUU6_9BACT rbh
Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein {ECO:0000313|EMBL:EON77920.1}; TaxID=1288963 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; un
mandelate racemase
scnpilot_p_inoc_scaffold_396_4
unknown

Not on your lists

comp(2409..2660)
-----------------
DNA (252bp)
protein (84aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_396_5
Pedosphaera parvula, Pedosphaera, Verrucomicrobiales, Verrucomicrobiae, Verrucomicrobia, Bacteria

Not on your lists

comp(2834..4048)
-----------------
DNA (1215bp)
protein (405aa)
Exo-alpha-sialidase {ECO:0000313|EMBL:EEF62356.1}; EC=3.2.1.18 {ECO:0000313|EMBL:EEF62356.1};; Flags: Precursor;; TaxID=320771 species="Bacteria; Verrucomicrobia; Verrucomicrobiae; Verrucomicrobiales;
Exo-alpha-sialidase (EC:3.2.1.18) rbh
Exo-alpha-sialidase n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XD10_9BACT rbh
scnpilot_p_inoc_scaffold_396_6
CG_Delta_07, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4152..5480)
-----------------
DNA (1329bp)
protein (443aa)
hypothetical protein n=1 Tax=Thioalkalivibrio RepID=UPI00037818B0
hypothetical protein Tax=CG_Delta_07
hypothetical protein
scnpilot_p_inoc_scaffold_396_7
unknown

Not on your lists

comp(5458..5898)
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_396_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6165..6983
-----------------
DNA (819bp)
protein (273aa)
Methylase involved in ubiquinone/menaquinone biosynthesis n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8H1_SINAD rbh
methylase
Methylase involved in ubiquinone/menaquinone biosynthesis {ECO:0000313|EMBL:AGA25532.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisph
scnpilot_p_inoc_scaffold_396_9
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

6956..8611
-----------------
DNA (1656bp)
protein (552aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9M7_SINAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGA25533.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
scnpilot_p_inoc_scaffold_396_10
unknown

Not on your lists

9121..9276
-----------------
DNA (156bp)
protein (52aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_396_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(9283..9783)
-----------------
DNA (501bp)
protein (167aa)
Fe2+/Zn2+ uptake regulation protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D800_SINAD
Fe2+/Zn2+ uptake regulation protein
Fe2+/Zn2+ uptake regulation protein {ECO:0000313|EMBL:AGA25534.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singul
scnpilot_p_inoc_scaffold_396_12
unknown

Not on your lists

10047..11435
-----------------
DNA (1389bp)
protein (463aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_396_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11487..12506)
-----------------
DNA (1020bp)
protein (340aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9J2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25535.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
scnpilot_p_inoc_scaffold_396_14
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12576..14120)
-----------------
DNA (1545bp)
protein (515aa)
Type II secretion system protein E n=1 Tax=Caldicellulosiruptor hydrothermalis (strain DSM 18901 / VKM B-2411 / 108) RepID=E4Q7B2_CALH1
Type II secretion system protein E {ECO:0000313|EMBL:KGG81452.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter
type ii secretion system protein e
scnpilot_p_inoc_scaffold_396_15
Isosphaera pallida, Isosphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

14682..15788
-----------------
DNA (1107bp)
protein (369aa)
Uncharacterized protein n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8R681_ISOPI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADV60776.1}; Flags: Precursor;; TaxID=575540 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Isosphaera.;" source="Iso
scnpilot_p_inoc_scaffold_396_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15931..16356
-----------------
DNA (426bp)
protein (142aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0D805_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25539.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
scnpilot_p_inoc_scaffold_396_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

16364..17218
-----------------
DNA (855bp)
protein (285aa)
ABC-type transport system involved in resistance to organic solvents, permease component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9N0_SINAD
organic solvents resistance ABC transporter permease
ABC-type transport system involved in resistance to organic solvents, permease component {ECO:0000313|EMBL:AGA25538.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales
scnpilot_p_inoc_scaffold_396_18
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

17265..18551
-----------------
DNA (1287bp)
protein (429aa)
ABC-type transport system involved in resistance to organic solvents, periplasmic component n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8H7_SINAD rbh
organic solvent resistance ABC transporter substrate-binding protein rbh
ABC-type transport system involved in resistance to organic solvents, periplasmic component {ECO:0000313|EMBL:AGA25537.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomyceta
scnpilot_p_inoc_scaffold_396_19
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

18795..19076
-----------------
DNA (282bp)
protein (94aa)
Anti-sigma-28 factor, FlgM n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA65_SINAD
Anti-sigma-28 factor, FlgM
Anti-sigma-28 factor, FlgM {ECO:0000313|EMBL:AGA25536.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera
scnpilot_p_inoc_scaffold_396_20
RBG_13_Planctomycetes_50_24_curated, Physcisphaerae, Planctomycetes, Bacteria

Not on your lists

comp(19647..21869)
-----------------
DNA (2223bp)
protein (741aa)
Glycoside hydrolase family 2 sugar binding n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XBB8_9BACT rbh
beta-galactosidase/beta-glucuronidase Tax=RBG_13_Planctomycetes_50_24_curated
beta-galactosidase/beta-glucuronidase
scnpilot_p_inoc_scaffold_396_21

Not on your lists

22373..23353
-----------------
DNA (981bp)
protein (327aa)
hypothetical protein n=1 Tax=Methylobacter sp. UW 659-2-H10 RepID=UPI00035C2A3F
Uncharacterized protein {ECO:0000313|EMBL:KKN85650.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
scnpilot_p_inoc_scaffold_396_22
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(24163..28485)
-----------------
DNA (4323bp)
protein (1441aa)
Putative membrane-bound dehydrogenase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCJ8_SINAD rbh
Putative membrane-bound dehydrogenase {ECO:0000313|EMBL:AGA27104.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Sing
membrane-bound dehydrogenase
scnpilot_p_inoc_scaffold_396_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(28658..31054)
-----------------
DNA (2397bp)
protein (799aa)
FG-GAP repeat protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DBT0_SINAD
FG-GAP repeat-containing protein
FG-GAP repeat protein {ECO:0000313|EMBL:AGA26293.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidi
scnpilot_p_inoc_scaffold_396_24
Rhodopirellula sp. SWK7, Rhodopirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(31201..32040)
-----------------
DNA (840bp)
protein (280aa)
Glycosyl transferase WecB/TagA/CpsF {ECO:0000313|EMBL:EMI41878.1}; EC=2.4.1.- {ECO:0000313|EMBL:EMI41878.1};; TaxID=595460 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctom
UDP-N-acetyl-D-mannosaminuronic acid transferase (EC:2.4.1.-)
hypothetical protein n=1 Tax=Zavarzinella formosa RepID=UPI0003759846
scnpilot_p_inoc_scaffold_396_25
Sphingomonas wittichii, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32061..32975)
-----------------
DNA (915bp)
protein (305aa)
PEP-CTERM locus, polysaccharide deactylase n=1 Tax=Sphingomonas wittichii (strain RW1 / DSM 6014 / JCM 10273) RepID=A5VDL4_SPHWW
polysaccharide deactylase
PEP-CTERM locus, polysaccharide deactylase {ECO:0000313|EMBL:ABQ70380.1}; TaxID=392499 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" sour
scnpilot_p_inoc_scaffold_396_26
Gloeobacter kilaueensis, Gloeobacter, Gloeobacterales, Gloeobacteria, Cyanobacteria, Bacteria

Not on your lists

comp(32999..33679)
-----------------
DNA (681bp)
protein (227aa)
Glycosyltransferase n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QCR5_9CYAN
glycosyltransferase
Glycosyltransferase {ECO:0000313|EMBL:AGY56712.1}; TaxID=1183438 species="Bacteria; Cyanobacteria; Gloeobacteria; Gloeobacterales; Gloeobacter.;" source="Gloeobacter kilaueensis JS1.;"
scnpilot_p_inoc_scaffold_396_27
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

34108..35994
-----------------
DNA (1887bp)
protein (629aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI000375AB18
Flp pilus assembly protein, secretin CpaC
Flp pilus assembly protein, secretin CpaC {ECO:0000313|EMBL:AGA30118.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="
scnpilot_p_inoc_scaffold_396_28
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

36009..36821
-----------------
DNA (813bp)
protein (271aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DLJ6_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA30117.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
scnpilot_p_inoc_scaffold_396_29
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

36839..37597
-----------------
DNA (759bp)
protein (253aa)
Tetratricopeptide repeat protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DN65_SINAD
hypothetical protein
Tetratricopeptide repeat protein {ECO:0000313|EMBL:AGA30116.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisp
scnpilot_p_inoc_scaffold_396_30
Pirellula staleyi, Pirellula, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(37577..38560)
-----------------
DNA (984bp)
protein (328aa)
Type II secretion system protein n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2R0F5_PIRSD
type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:ADB14823.1}; TaxID=530564 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Pirellula.;" source="Pirellula stal
Displaying items 1-30 of 110 in total

View Taxonomy