ggKbase home page

scnpilot_p_inoc_scaffold_413

Search features with annotation key words

Displaying items 1-30 of 136 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_413_1
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(3..380)
-----------------
DNA (378bp)
protein (126aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJ82_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA28868.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
scnpilot_p_inoc_scaffold_413_2
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

989..2545
-----------------
DNA (1557bp)
protein (519aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9G5_SINAD rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGA25510.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
scnpilot_p_inoc_scaffold_413_3
unknown

Not on your lists

2868..3302
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_413_4
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

3289..4080
-----------------
DNA (792bp)
protein (264aa)
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8F2_SINAD
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein
CobQ/CobB/MinD/ParA nucleotide binding domain-containing protein {ECO:0000313|EMBL:AGA25512.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Sin
scnpilot_p_inoc_scaffold_413_5
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

4099..4899
-----------------
DNA (801bp)
protein (267aa)
Type II secretory pathway, component ExeA (Predicted ATPase) n=2 Tax=Singulisphaera acidiphila RepID=L0D9K7_SINAD
type II secretory pathway protein ExeA
Type II secretory pathway, component ExeA (Predicted ATPase) {ECO:0000313|EMBL:AGA25513.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singuli
scnpilot_p_inoc_scaffold_413_6
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

5069..6955
-----------------
DNA (1887bp)
protein (629aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI0003758FD6 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGA25514.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
scnpilot_p_inoc_scaffold_413_7
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

7322..9949
-----------------
DNA (2628bp)
protein (876aa)
Lhr-like helicase n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DA48_SINAD rbh
Lhr-like helicase {ECO:0000313|EMBL:AGA25516.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphil
Lhr-like helicase rbh
scnpilot_p_inoc_scaffold_413_8
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

9949..10668
-----------------
DNA (720bp)
protein (240aa)
Putative phosphoesterase, ICC n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8F8_SINAD
phosphoesterase, ICC
Putative phosphoesterase, ICC {ECO:0000313|EMBL:AGA25517.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphae
scnpilot_p_inoc_scaffold_413_9
unknown

Not on your lists

10719..11159
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_413_10
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(11277..12845)
-----------------
DNA (1569bp)
protein (523aa)
hypothetical protein n=1 Tax=Singulisphaera acidiphila RepID=UPI00037D77E4 rbh
YTV protein {ECO:0000313|EMBL:AGA25521.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidiphila (str
YTV protein rbh
scnpilot_p_inoc_scaffold_413_11
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(13298..14233)
-----------------
DNA (936bp)
protein (312aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8G2_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25522.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
scnpilot_p_inoc_scaffold_413_12
Roseiflexus castenholzii, Roseiflexus, Chloroflexales, Chloroflexia, Chloroflexi, Bacteria

Not on your lists

14439..15245
-----------------
DNA (807bp)
protein (269aa)
Putative uncharacterized protein n=1 Tax=Roseiflexus castenholzii (strain DSM 13941 / HLO8) RepID=A7NLA4_ROSCS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABU58277.1}; TaxID=383372 species="Bacteria; Chloroflexi; Chloroflexia; Chloroflexales; Roseiflexineae; Roseiflexaceae; Roseiflexus.;" source="Roseiflexus cas
scnpilot_p_inoc_scaffold_413_13
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

15522..16403
-----------------
DNA (882bp)
protein (294aa)
PEP-CTERM putative exosortase interaction domain-containing protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DAZ8_SINAD
exosortase interaction domain-containing protein
PEP-CTERM putative exosortase interaction domain-containing protein {ECO:0000313|EMBL:AGA26554.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae;
scnpilot_p_inoc_scaffold_413_14
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(16279..17115)
-----------------
DNA (837bp)
protein (279aa)
RNA polymerase sigma factor n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DCG0_SINAD rbh
sigma-70 family RNA polymerase sigma factor rbh
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphae
scnpilot_p_inoc_scaffold_413_15
Oscillatoria acuminata, Oscillatoria, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

17567..18754
-----------------
DNA (1188bp)
protein (396aa)
Methyltransferase {ECO:0000256|RuleBase:RU362026}; EC=2.1.1.- {ECO:0000256|RuleBase:RU362026};; TaxID=56110 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Oscillatoria.;" so
DNA modification methylase n=1 Tax=Oscillatoria acuminata PCC 6304 RepID=K9TLM4_9CYAN rbh
DNA modification methylase
scnpilot_p_inoc_scaffold_413_16
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists


comp(18863..20656)
-----------------
DNA (1794bp)
protein (598aa)
30S ribosomal protein S1 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DD27_SINAD rbh
Ribosomal protein S1 {ECO:0000313|EMBL:AGA26556.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera acidip
30S ribosomal protein S1 rbh
scnpilot_p_inoc_scaffold_413_17
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

21371..21814
-----------------
DNA (444bp)
protein (148aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D8M9_SINAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25759.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
scnpilot_p_inoc_scaffold_413_18

Not on your lists

22589..23683
-----------------
DNA (1095bp)
protein (365aa)
Uncharacterized protein n=2 Tax=Singulisphaera acidiphila RepID=L0DEE8_SINAD rbh
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48405.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_413_19
unknown

Not on your lists

comp(23729..23932)
-----------------
DNA (204bp)
protein (68aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_413_20
Rhodopseudomonas palustris, Rhodopseudomonas, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24054..29366
-----------------
DNA (5313bp)
protein (1771aa)
Outer membrane autotransporter barrel domain protein n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VDI8_RHOPX
outer membrane autotransporter barrel domain-containing protein
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:ADU43922.1}; TaxID=652103 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomona
scnpilot_p_inoc_scaffold_413_21
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(29372..30322)
-----------------
DNA (951bp)
protein (317aa)
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DMH0_SINAD rbh
oxidoreductase, aryl-alcohol dehydrogenase like protein
Putative oxidoreductase, aryl-alcohol dehydrogenase like protein {ECO:0000313|EMBL:AGA29861.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Sin
scnpilot_p_inoc_scaffold_413_22

Not on your lists

30531..31187
-----------------
DNA (657bp)
protein (219aa)
Haloacid dehalogenase superfamily protein, subfamily IA, variant 3 with third motif having DD or ED n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D7M8_SINAD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48401.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
haloacid dehalogenase superfamily protein
scnpilot_p_inoc_scaffold_413_23
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

31207..31917
-----------------
DNA (711bp)
protein (237aa)
CAAX prenyl protease-related protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9B7_SINAD
CAAX prenyl protease-related protein
CAAX prenyl protease-related protein {ECO:0000313|EMBL:AGA25256.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singu
scnpilot_p_inoc_scaffold_413_24

Not on your lists

31931..33127
-----------------
DNA (1197bp)
protein (399aa)
Putative membrane protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DJG3_SINAD
Uncultured bacterium genome assembly Metasoil_fosmids_resub {ECO:0000313|EMBL:CEF48404.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
scnpilot_p_inoc_scaffold_413_25
unknown

Not on your lists

33279..33848
-----------------
DNA (570bp)
protein (190aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_413_26
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

34199..37180
-----------------
DNA (2982bp)
protein (994aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0DNT8_SINAD rbh
Uncharacterized protein {ECO:0000313|EMBL:AGA30907.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
hypothetical protein rbh
scnpilot_p_inoc_scaffold_413_27
unknown

Not on your lists

37307..37531
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_413_28
RBG_16_Spirochaetes_49_21_curated, Spirochaetes, Bacteria

Not on your lists

37545..38060
-----------------
DNA (516bp)
protein (172aa)
Putative uncharacterized protein n=1 Tax=uncultured Desulfobacterium sp. RepID=E1YAF3_9DELT
hypothetical protein Tax=RBG_16_Spirochaetes_49_21_curated
hypothetical protein
scnpilot_p_inoc_scaffold_413_29
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(38260..39438)
-----------------
DNA (1179bp)
protein (393aa)
Uncharacterized protein n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D9S8_SINAD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGA25376.1}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulisphaera aci
scnpilot_p_inoc_scaffold_413_30
Singulisphaera acidiphila, Singulisphaera, Planctomycetales, Planctomycetia, Planctomycetes, Bacteria

Not on your lists

comp(39603..40100)
-----------------
DNA (498bp)
protein (166aa)
UPF0234 protein Sinac_0974 n=1 Tax=Singulisphaera acidiphila (strain ATCC BAA-1392 / DSM 18658 / VKM B-2454 / MOB10) RepID=L0D836_SINAD
hypothetical protein
UPF0234 protein Sinac_0974 {ECO:0000256|HAMAP-Rule:MF_00632}; TaxID=886293 species="Bacteria; Planctomycetes; Planctomycetia; Planctomycetales; Planctomycetaceae; Singulisphaera.;" source="Singulispha
Displaying items 1-30 of 136 in total

View Taxonomy