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scnpilot_p_inoc_scaffold_4245

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_4245_1
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..118
DNA (117bp) protein (39aa)
elongation factor Tu n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000374DB53
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacter
scnpilot_p_inoc_scaffold_4245_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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291..674
DNA (384bp) protein (128aa)
Protein translocase subunit SecE n=1 Tax=Acidovorax sp. NO-1 RepID=H0C451_9BURK
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovora
preprotein translocase, SecE subunit
scnpilot_p_inoc_scaffold_4245_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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675..1265
DNA (591bp) protein (197aa)
NusG antitermination factor id=12551361 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
NusG antitermination factor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
NusG antitermination factor
scnpilot_p_inoc_scaffold_4245_4
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1392..1823
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=2 Tax=Acidovorax RepID=K0I5I7_9BURK
50S ribosomal protein L11
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovo
scnpilot_p_inoc_scaffold_4245_5
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1824..2519
DNA (696bp) protein (232aa)
50S ribosomal protein L1 n=1 Tax=Acidovorax avenae (strain ATCC 19860 / DSM 7227 / JCM 20985 / NCPPB 1011) RepID=F0Q989_ACIAP
50S ribosomal protein L1
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae
scnpilot_p_inoc_scaffold_4245_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2747..3253
DNA (507bp) protein (169aa)
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 id=12551358 bin=BDI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
rplJ; 50S ribosomal protein L10; K02864 large subunit ribosomal protein L10 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
50S ribosomal protein L10 rbh
scnpilot_p_inoc_scaffold_4245_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3298..3672
DNA (375bp) protein (125aa)
50S ribosomal protein L7/L12 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T740_ACIDE
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax de
rplL; 50S ribosomal protein L7/L12
scnpilot_p_inoc_scaffold_4245_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3968..8080
DNA (4113bp) protein (1371aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6) id=12551356 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
scnpilot_p_inoc_scaffold_4245_9
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8182..8472
DNA (291bp) protein (97aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' n=3 Tax=Comamonas testosteroni RepID=D0IXL0_COMT2
DNA-directed RNA polymerase subunit beta'
Displaying 9 items

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