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scnpilot_p_inoc_scaffold_222

Search features with annotation key words

Displaying items 91-120 of 126 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_222_91
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

103665..105188
DNA (1524bp) protein (508aa)
nickel-dependent hydrogenase large subunit id=12551286 bin=BDI species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
nickel-dependent hydrogenase large subunit Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
nickel-dependent hydrogenase large subunit
scnpilot_p_inoc_scaffold_222_92
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

105188..105754
DNA (567bp) protein (189aa)
hydrogenase maturation protease id=12551287 bin=BDI species=Thauera sp. 63 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hydrogenase maturation protease Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
[NiFe] hydrogenase (HoxH-specific) C-terminal protease
scnpilot_p_inoc_scaffold_222_93
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(105678..108419)
DNA (2742bp) protein (914aa)
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) id=12551288 bin=BDI species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
scnpilot_p_inoc_scaffold_222_94
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108419..108793)
DNA (375bp) protein (125aa)
response regulator receiver protein id=12551289 bin=BDI species=unknown genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
response regulator receiver protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
response regulator receiver protein
scnpilot_p_inoc_scaffold_222_95
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(108790..111345)
DNA (2556bp) protein (852aa)
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Multi-sensor signal transduction histidine kinase id=2279152 bin=GWB2_Chloroflexi_54_36 species=Methylotenera mobilis genus=Methylotenera taxon_order=Methylophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWB2_Chloroflexi_54_36 organism_group=Chloroflexi organism_desc=a81
multi-sensor hybrid histidine kinase
scnpilot_p_inoc_scaffold_222_96
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

111611..113443
DNA (1833bp) protein (611aa)
glutamate synthase (nadph) (EC:1.4.1.13)
4Fe-4S ferredoxin id=12551291 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria rbh
4Fe-4S ferredoxin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_222_97
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

113440..115272
DNA (1833bp) protein (611aa)
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] id=12551292 bin=BDI species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
pyruvate flavodoxin/ferredoxin oxidoreductase-like protein
scnpilot_p_inoc_scaffold_222_98
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

115269..116324
DNA (1056bp) protein (352aa)
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] id=12551293 bin=BDI species=unknown genus=Rhodoferax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
2-oxoglutarate ferredoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
2-oxoglutarate ferredoxin oxidoreductase subunit beta
scnpilot_p_inoc_scaffold_222_99
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116352..116795
DNA (444bp) protein (148aa)
signal-transduction protein id=12551294 bin=BDI species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=BDI organism_group=Betaproteobacteria
signal-transduction protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
signal-transduction protein
scnpilot_p_inoc_scaffold_222_100
GWA2_Burkholderiales_64_37_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

116878..117459
DNA (582bp) protein (194aa)
Response regulator receiver n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS66_9BURK
response regulator receiver Tax=GWA2_Burkholderiales_64_37_curated
response regulator receiver
scnpilot_p_inoc_scaffold_222_101
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117484..117699)
DNA (216bp) protein (72aa)
hypothetical protein id=12551296 bin=BDI species=unknown genus=Pasteurella taxon_order=Pasteurellales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_222_102
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(117803..118327)
DNA (525bp) protein (175aa)
hypothetical protein id=12551297 bin=BDI species=Limnohabitans sp. Rim28 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_222_103
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118381..118872)
DNA (492bp) protein (164aa)
hypothetical protein id=12551297 bin=BDI species=Limnohabitans sp. Rim28 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_222_104
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(118886..120169)
DNA (1284bp) protein (428aa)
Putative uncharacterized protein n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WUK1_9BURK rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_222_105
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(120242..122560)
DNA (2319bp) protein (773aa)
hypothetical protein n=1 Tax=Caldimonas manganoxidans RepID=UPI00036FDAFF rbh
TonB-dependent receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
TonB-dependent receptor
scnpilot_p_inoc_scaffold_222_106
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(122633..123031)
DNA (399bp) protein (133aa)
id=12551301 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
id=12551301 bin=BDI tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_222_107
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(123129..124931)
DNA (1803bp) protein (601aa)
Formyl transferase domain protein n=1 Tax=Leptothrix cholodnii (strain ATCC 51168 / LMG 8142 / SP-6) RepID=B1Y5K3_LEPCP rbh
formyl transferase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
formyl transferase domain-containing protein
scnpilot_p_inoc_scaffold_222_108
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(124939..125997)
DNA (1059bp) protein (353aa)
hydrogenase expression/formation protein hypE; K04655 hydrogenase expression/formation protein HypE Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hydrogenase expression/formation protein hypE; K04655 hydrogenase expression/formation protein HypE id=12553599 bin=BDI species=unknown genus=unknown taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypE1; carbamoyl phosphate phosphatase, hydrogenase 3 maturation protein
scnpilot_p_inoc_scaffold_222_109
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(125994..127133)
DNA (1140bp) protein (380aa)
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD id=12553598 bin=BDI species=Leptothrix cholodnii genus=Leptothrix taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypD1; hydrogenase isoenzymes formation protein HypD
scnpilot_p_inoc_scaffold_222_110
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127130..127336)
DNA (207bp) protein (69aa)
hydrogenase assembly chaperone HypC/HupF; K04653 hydrogenase expression/formation protein HypC id=12553597 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hydrogenase assembly chaperone HypC/HupF; K04653 hydrogenase expression/formation protein HypC Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hydrogenase assembly chaperone HypC/HupF
scnpilot_p_inoc_scaffold_222_111
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(127351..128514)
DNA (1164bp) protein (388aa)
hypF1; hydrogenase maturation protein HypF1 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypF1; hydrogenase maturation protein HypF1 id=5083318 bin=GWF1_Burkholderiales_GWF1_66_17 species=Cupriavidus metallidurans genus=Cupriavidus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWF1_Burkholderiales_GWF1_66_17 organism_group=Betaproteobacteria organism_desc="Control" bin for RuBisCO paper Leave in GW2011 GOOD rbh
hypF1; hydrogenase maturation protein HypF1
scnpilot_p_inoc_scaffold_222_112
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(128524..129468)
DNA (945bp) protein (315aa)
hydrogenase nickel incorporation protein HypB; K04652 hydrogenase nickel incorporation protein HypB id=12553594 bin=BDI species=Polaromonas naphthalenivorans genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypB; hydrogenase nickel incorporation protein HypB; K04652 hydrogenase nickel incorporation protein HypB Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
Ni2+-binding GTPase involved in regulation of expression and maturation of urease and hydrogenase
scnpilot_p_inoc_scaffold_222_113
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129483..129887)
DNA (405bp) protein (135aa)
hypA1; hydrogenase nickel incorporation protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypA1; hydrogenase nickel incorporation protein HypA; K04651 hydrogenase nickel incorporation protein HypA/HybF id=12553593 bin=BDI species=Curvibacter lanceolatus genus=Curvibacter taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypA1; hydrogenase nickel incorporation protein HypA
scnpilot_p_inoc_scaffold_222_114
Methyloversatilis universalis, Methyloversatilis, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(129907..130512)
DNA (606bp) protein (202aa)
urease accessory protein UreJ n=1 Tax=Methyloversatilis universalis RepID=UPI00036469D1
HupE/UreJ protein {ECO:0000313|EMBL:EGK70320.1}; TaxID=1000565 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Methyloversatilis.;" source="Methyloversatilis univ
HupE/UreJ protein
scnpilot_p_inoc_scaffold_222_115
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(130604..132169)
DNA (1566bp) protein (522aa)
RNA polymerase sigma-54 subunit RpoN id=12553592 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
RNA polymerase sigma-54 subunit RpoN Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
RNA polymerase sigma-54 subunit RpoN
scnpilot_p_inoc_scaffold_222_116
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132192..132959)
DNA (768bp) protein (256aa)
sulfate-transporting ATPase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
sulfate-transporting ATPase id=12553591 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter-like protein
scnpilot_p_inoc_scaffold_222_117
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(132971..133660)
DNA (690bp) protein (230aa)
OstA-like protein id=12553590 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
OstA-like protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
OstA-like protein
scnpilot_p_inoc_scaffold_222_118
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(133786..134433)
DNA (648bp) protein (216aa)
DSBA oxidoreductase; K03673 thiol:disulfide interchange protein DsbA Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
dsba oxidoreductase; K03673 thiol:disulfide interchange protein DsbA id=12551441 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
dsba oxidoreductase
scnpilot_p_inoc_scaffold_222_119
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(134486..135115)
DNA (630bp) protein (210aa)
Sporulation domain-containing protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6E5_9BURK
sporulation domain-containing protein
Sporulation domain-containing protein {ECO:0000313|EMBL:AFU48150.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovor
scnpilot_p_inoc_scaffold_222_120
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(135130..136803)
DNA (1674bp) protein (558aa)
argS; arginyl-tRNA ligase (EC:6.1.1.19) id=12551439 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
argS; arginyl-tRNA ligase (EC:6.1.1.19) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
argS; arginyl-tRNA ligase (EC:6.1.1.19)
Displaying items 91-120 of 126 in total

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