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scnpilot_p_inoc_scaffold_222_115

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(130604..132169)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-54 subunit RpoN id=12553592 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 81.2
  • Coverage: 522.0
  • Bit_score: 828
  • Evalue 4.30e-237
RNA polymerase sigma-54 subunit RpoN Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 81.0
  • Coverage: 521.0
  • Bit_score: 827
  • Evalue 1.30e-236
RNA polymerase sigma-54 subunit RpoN similarity KEGG
DB: KEGG
  • Identity: 78.1
  • Coverage: 526.0
  • Bit_score: 788
  • Evalue 1.40e-225

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Taxonomy

RLO_Burkholderiales_65_40 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1566
ATGAAGCCCGGGCTCTCCCTCCGCGTCTCGCAGCACCTGGCGCTGACGCCGCAGTTGCAGCAGTCCATCCGCCTGCTGCAACTGTCCACGCAGGAGCTGTCGCAGGAGGTCGAGCAGATGCTCGACGACAACCCCTTTCTGGAGCGCGCCAGCGACGAGGCCGAGCGCGAGGCCTTCGGCCTGGCCCAGGCCGACGCCCCTGCGCAGCGGGACGATGCGGCCGCAGACCATGCTATTGTTTCAGGAGCTTCTGGCGCTGACGCAGCAAGCCCTGAAGGCCAAAATGATGCAGAAATCACCGTCCTGGGCGACGAGCCTGGCTGGGAGGGCGACGGCAGCACCGACATGGCCACCGACGACAGCGAGTGGGGCGGCGACGCCCCGGCGCGCCAGCATGGCGCGTCCGCCGACGAGGACACAGACGCCAGCGAATGGCTGCACGCCCCGGAGTCGCTCACCGCGCACCTGCACCGCCAGGCCCTGGCCCTGCGCCTGTCCGACGTGGACATGGCGGCGCTGCGCTTTCTCATCGAATCGCTGAACGAGGACGGCTACCTCGAAGACGCCATCGAAACCCTGGCCCAGGGCCTGGCGGGCACGGACGACCCCGCGCAGGTCGATGAACTGGTGCACCACTTCACCGTGGCCCTGCGCCTGCTGCAAAGCCTGGAGCCCACCGGCGTGGGCGCGCGCGACCTGGCCGAGTGCCTGGGCCTGCAATTGCGCGCGCTGCAGCAGGAGGGCGCGGCCGACGCCGAAGCCGTGCAGGCCGCGCTGTGCATCTGCGCGCAGCCGCTGGACCTGCTGGCGCGGCGCGATGTGCGCCGCCTGATGCAGGTGTGCGGCTGCAGCGAGGAGCGCACCCGCGCCGCTATGGCGCTCATCACCCGGCTGGAGCCGCGCCCGGGCCGGCGCTTCGCCGACGTGGAGCGCAACGCCGTGCGGCCCGACGTGCTCGTCACGCGCAGCGGGCGCGGCGGGCAGCATTTCGTGGTGCAGCTCAACCCCGAGGTCATGCCCCGGCTGCGCGTGCACGACGTGTATGCCGGCGCCCTGCGCGGCCACCGCGGGGGCGAGGGCCACCAGGCGCTGCAGCAGCGCCTGCAGGAGGCGCGCTGGTTCATCAAGAACATCCAGCAGCGCTTTGACACCATCCTGCGCGTCGCGCGCGCCATCGTCGAGCGGCAGAAGAACTTCTTCGTGCATGGCGAGCTGGCCATGCGCCCCCTGGTGCTGCGCGACATTGCCGAAGAACTGGGCCTGCACGAATCGACCATCTCGCGCGTGACCACGGCCAAGTACATGGCCACGCCGCAGGGTACCTTCGAGCTCAAGTACTTCTTCGGCTCGGGCCTGGGCACCGACACGGGCGGCAACGCATCGAGCACGGCCGTGCGCGCGCTCATCAAGCAGTTCATTGCCGCCGAAAACCCGGCCAAGCCCCTGTCCGACAGCCAGTTGGCCGACATGCTCAAGGAGCAGGGCATCGAGTGCGCGCGCCGCACCGTCGCCAAATACCGCGAGGCGCTGCGCATTCCGGTCGCCACGCTGCGCAAGGCGTTGTAA
PROTEIN sequence
Length: 522
MKPGLSLRVSQHLALTPQLQQSIRLLQLSTQELSQEVEQMLDDNPFLERASDEAEREAFGLAQADAPAQRDDAAADHAIVSGASGADAASPEGQNDAEITVLGDEPGWEGDGSTDMATDDSEWGGDAPARQHGASADEDTDASEWLHAPESLTAHLHRQALALRLSDVDMAALRFLIESLNEDGYLEDAIETLAQGLAGTDDPAQVDELVHHFTVALRLLQSLEPTGVGARDLAECLGLQLRALQQEGAADAEAVQAALCICAQPLDLLARRDVRRLMQVCGCSEERTRAAMALITRLEPRPGRRFADVERNAVRPDVLVTRSGRGGQHFVVQLNPEVMPRLRVHDVYAGALRGHRGGEGHQALQQRLQEARWFIKNIQQRFDTILRVARAIVERQKNFFVHGELAMRPLVLRDIAEELGLHESTISRVTTAKYMATPQGTFELKYFFGSGLGTDTGGNASSTAVRALIKQFIAAENPAKPLSDSQLADMLKEQGIECARRTVAKYREALRIPVATLRKAL*