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scnpilot_p_inoc_scaffold_856

Search features with annotation key words

Displaying items 1-30 of 59 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_856_1
Verminephrobacter eiseniae, Verminephrobacter, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..1322)
-----------------
DNA (1320bp)
protein (440aa)
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase id=12552727 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) {ECO:0000313|EMBL:ABM58960.1}; TaxID=391735 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Vermine
scnpilot_p_inoc_scaffold_856_2
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1551..2300
-----------------
DNA (750bp)
protein (250aa)
Crp/Fnr family transcriptional regulator id=12552728 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Crp/Fnr family transcriptional regulator {ECO:0000313|EMBL:EHL21567.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acido
Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_856_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2419..5034
-----------------
DNA (2616bp)
protein (872aa)
DNA mismatch repair protein MutS n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7M6_9BURK
DNA mismatch repair protein MutS Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
DNA mismatch repair protein MutS
scnpilot_p_inoc_scaffold_856_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5109..5567
-----------------
DNA (459bp)
protein (153aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRW8_9BURK
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_856_5
Sulfuritalea hydrogenivorans, Sulfuritalea, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5571..5885
-----------------
DNA (315bp)
protein (105aa)
hypothetical protein
hypothetical protein id=12552732 bin=BDI species=Methylobacter sp. UW 659-2-H10 genus=Methylobacter taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:BAO28995.1}; TaxID=1223802 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Sulfuritalea.;" source="Sulfuritalea hydrogen
scnpilot_p_inoc_scaffold_856_6
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5958..6623
-----------------
DNA (666bp)
protein (222aa)
N6 adenine-specific DNA methyltransferase protein, N12 class n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRW6_9BURK
N6 adenine-specific DNA methyltransferase protein, N12 class {ECO:0000313|EMBL:EHL24982.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovo
N6 adenine-specific DNA methyltransferase protein, N12 class
scnpilot_p_inoc_scaffold_856_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6649..6915
-----------------
DNA (267bp)
protein (89aa)
Putative uncharacterized protein n=1 Tax=Acidovorax sp. NO-1 RepID=H0BRW5_9BURK
Putative uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_856_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7000..7818
-----------------
DNA (819bp)
protein (273aa)
alpha/beta hydrolase fold protein id=12552735 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
alpha/beta hydrolase fold protein
scnpilot_p_inoc_scaffold_856_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7968..9770
-----------------
DNA (1803bp)
protein (601aa)
diguanylate cyclase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
diguanylate cyclase id=12552736 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
diguanylate cyclase
scnpilot_p_inoc_scaffold_856_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9736..10575)
-----------------
DNA (840bp)
protein (280aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12552737 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein
scnpilot_p_inoc_scaffold_856_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10610..11434)
-----------------
DNA (825bp)
protein (275aa)
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27) id=12552738 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
undecaprenyl pyrophosphate phosphatase (EC:3.6.1.27)
scnpilot_p_inoc_scaffold_856_12
unknown

Not on your lists

11672..11770
-----------------
DNA (99bp)
protein (33aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_856_13
unknown

Not on your lists

11855..12001
-----------------
DNA (147bp)
protein (49aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_856_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12217..12768
-----------------
DNA (552bp)
protein (184aa)
Uncharacterized protein n=2 Tax=Alicycliphilus denitrificans RepID=E8TXM0_ALIDB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB83785.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus den
scnpilot_p_inoc_scaffold_856_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12796..13086
-----------------
DNA (291bp)
protein (97aa)
2TM domain-containing protein id=12552744 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
2TM domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_856_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13086..14153
-----------------
DNA (1068bp)
protein (356aa)
hypothetical protein n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035C152E rbh
histidine kinase internal subunit Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
signal transduction histidine kinase LytS
scnpilot_p_inoc_scaffold_856_17
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14150..14974
-----------------
DNA (825bp)
protein (275aa)
response regulator receiver protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
response regulator receiver protein id=12552745 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
response regulator receiver protein
scnpilot_p_inoc_scaffold_856_18
Thauera linaloolentis, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15223..17160
-----------------
DNA (1938bp)
protein (646aa)
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Thauera linaloolentis 47Lol = DSM 12138 RepID=N6XYC5_9RHOO rbh
PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:ENO86816.1}; TaxID=1123367 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae
diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_856_19
Shewanella sp. HN-41, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17251..18240)
-----------------
DNA (990bp)
protein (330aa)
Diguanylate cyclase with GAF sensor (EC:2.7.7.65)
diguanylate cyclase n=1 Tax=Marinobacterium stanieri RepID=UPI0002559318 rbh
Diguanylate cyclase with GAF sensor {ECO:0000313|EMBL:EGM68438.1}; TaxID=327275 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewanell
scnpilot_p_inoc_scaffold_856_20
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18357..19835)
-----------------
DNA (1479bp)
protein (493aa)
Efflux transporter, outer membrane factor lipoprotein, NodT family n=1 Tax=Acidovorax sp. CF316 RepID=J0KHC8_9BURK rbh
Efflux transporter, outer membrane factor lipoprotein, NodT family {ECO:0000313|EMBL:EJE53035.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiale
rnd efflux system, outer membrane lipoprotein, nodt family
scnpilot_p_inoc_scaffold_856_21
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19835..22951)
-----------------
DNA (3117bp)
protein (1039aa)
Acriflavin resistance protein n=1 Tax=Acidovorax sp. KKS102 RepID=K0I7Q6_9BURK rbh
Multidrug transporter {ECO:0000313|EMBL:KJA10518.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
acriflavin resistance protein
scnpilot_p_inoc_scaffold_856_22
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23126..26227)
-----------------
DNA (3102bp)
protein (1034aa)
Acriflavin resistance protein n=1 Tax=Alicycliphilus denitrificans (strain DSM 18852 / JCM 14587 / BC) RepID=E8TXL6_ALIDB
Acriflavin resistance protein {ECO:0000313|EMBL:ADV00784.1}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphil
acriflavin resistance protein
scnpilot_p_inoc_scaffold_856_23
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26243..27700)
-----------------
DNA (1458bp)
protein (486aa)
Efflux transporter, RND family, MFP subunit n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GDX1_ALIDK rbh
RND family efflux transporter MFP subunit
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:AEB83788.1}; TaxID=596154 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source
scnpilot_p_inoc_scaffold_856_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27790..28431)
-----------------
DNA (642bp)
protein (214aa)
ABC transporter-like protein id=12552749 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ABC transporter-like protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ABC transporter-like protein
scnpilot_p_inoc_scaffold_856_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28444..28872
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12552750 bin=BDI species=Acidovorax citrulli genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_856_26
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29011..29886
-----------------
DNA (876bp)
protein (292aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=12552751 bin=BDI species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
inner-membrane translocator
scnpilot_p_inoc_scaffold_856_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29903..30979
-----------------
DNA (1077bp)
protein (359aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=12552752 bin=BDI species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
inner-membrane translocator
scnpilot_p_inoc_scaffold_856_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30976..31773
-----------------
DNA (798bp)
protein (266aa)
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein id=12552753 bin=BDI species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ABC transporter-like protein; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ABC transporter-like protein
scnpilot_p_inoc_scaffold_856_29
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31770..32570
-----------------
DNA (801bp)
protein (267aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein id=12552754 bin=BDI species=Polaromonas sp. CF318 genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ABC transporter-like protein
scnpilot_p_inoc_scaffold_856_30
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32575..34428
-----------------
DNA (1854bp)
protein (618aa)
AMP-forming long-chain acyl-CoA synthetase n=1 Tax=Polaromonas sp. CF318 RepID=J2L502_9BURK rbh
AMP-dependent synthetase and ligase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
AMP-dependent synthetase and ligase
Displaying items 1-30 of 59 in total

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