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scnpilot_p_inoc_scaffold_1165

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1165_1
RLO_Burkholderiales_61_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..459
DNA (459bp) protein (153aa)
glyceraldehyde-3-phosphate dehydrogenase; K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_61_40_curated
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12); K00134 glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12] id=12551755 bin=BDI species=Acidovorax ebreus genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
glyceraldehyde-3-phosphate dehydrogenase (EC:1.2.1.12)
scnpilot_p_inoc_scaffold_1165_2
Comamonas aquatica, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(691..909)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Bordetella petrii (strain ATCC BAA-461 / DSM 12804 / CCUG 43448) RepID=A9ISF4_BORPD
SlyX family protein {ECO:0000313|EMBL:EXU79536.1}; TaxID=1457173 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas aquatica DA1877.
hypothetical protein
scnpilot_p_inoc_scaffold_1165_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1014..1358)
DNA (345bp) protein (115aa)
ribosomal subunit Interface protein id=12551758 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ribosomal subunit Interface protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ribosomal subunit Interface protein
scnpilot_p_inoc_scaffold_1165_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1447..3414)
DNA (1968bp) protein (656aa)
guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
guanylate cyclase; K01768 adenylate cyclase [EC:4.6.1.1] id=12551759 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
guanylate cyclase
scnpilot_p_inoc_scaffold_1165_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3395..6967)
DNA (3573bp) protein (1191aa)
TonB-dependent receptor n=1 Tax=Acidovorax sp. NO-1 RepID=H0BS70_9BURK
TonB-dependent receptor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
FecR family/TPR repeat domain-containing protein
scnpilot_p_inoc_scaffold_1165_6
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7044..7397
DNA (354bp) protein (118aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TD11_ACIDE
Membrane protein {ECO:0000313|EMBL:KJA12284.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1165_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7365..9287)
DNA (1923bp) protein (641aa)
Peptidase M48 Ste24p n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4GAW0_ALIDK
peptidase M48 Ste24p Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
peptidase M48 Ste24p
scnpilot_p_inoc_scaffold_1165_8
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9555..10151
DNA (597bp) protein (199aa)
Putative uncharacterized protein n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2DY08_9GAMM
Putative uncharacterized protein {ECO:0000313|EMBL:EGV32800.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodoco
uncharacterized protein conserved in cyanobacteria
scnpilot_p_inoc_scaffold_1165_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10155..11708)
DNA (1554bp) protein (518aa)
O-antigen polymerase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I532_9BURK
O-antigen polymerase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
O-antigen polymerase
scnpilot_p_inoc_scaffold_1165_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12048..12836)
DNA (789bp) protein (263aa)
Uncharacterized protein n=1 Tax=Neisseria flavescens SK114 RepID=C5TKY0_NEIFL
fimbrial assembly protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
putative fimbrial assembly protein FimB
scnpilot_p_inoc_scaffold_1165_11
Pseudomonas aeruginosa, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13450..13986)
DNA (537bp) protein (179aa)
Type IV pilin structural subunit n=4 Tax=Pseudomonas aeruginosa RepID=I6S412_PSEAI
type IV pilin structural subunit
Type 4 pilin {ECO:0000313|EMBL:AAC41410.1}; Type IV pilin {ECO:0000313|EMBL:AAL12242.1}; TaxID=287 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomona
scnpilot_p_inoc_scaffold_1165_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14167..14958)
DNA (792bp) protein (264aa)
Metal-dependent hydrolase, beta-lactamase superfamily III n=1 Tax=Acidovorax sp. CF316 RepID=J0TYT1_9BURK
3',5'-cyclic-nucleotide phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
3',5'-cyclic-nucleotide phosphodiesterase
scnpilot_p_inoc_scaffold_1165_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14983..17265)
DNA (2283bp) protein (761aa)
Putative transmembrane sensor domain protein n=1 Tax=Acidovorax sp. CF316 RepID=J1E9G9_9BURK rbh
adenylate/guanylate cyclase with chase sensor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
adenylate/guanylate cyclase with chase sensor
scnpilot_p_inoc_scaffold_1165_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17294..17953)
DNA (660bp) protein (220aa)
FHA domain-containing protein id=12550715 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
FHA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
FHA domain-containing protein
scnpilot_p_inoc_scaffold_1165_15
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18004..18810)
DNA (807bp) protein (269aa)
protein serine/threonine phosphatase id=12550716 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
protein serine/threonine phosphatase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
protein serine/threonine phosphatase
scnpilot_p_inoc_scaffold_1165_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18807..21458)
DNA (2652bp) protein (884aa)
Serine/threonine protein kinase n=1 Tax=Acidovorax sp. KKS102 RepID=K0I6U6_9BURK
serine/threonine protein kinase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
serine/threonine protein kinase
scnpilot_p_inoc_scaffold_1165_17
Azoarcus sp. BH72, Azoarcus, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21660..22553)
DNA (894bp) protein (298aa)
sucD; succinyl-CoA synthetase subunit alpha (EC:6.2.1.5)
Succinyl-CoA ligase [ADP-forming] subunit alpha {ECO:0000256|RuleBase:RU000699}; EC=6.2.1.5 {ECO:0000256|RuleBase:RU000699, ECO:0000313|EMBL:CAL95948.1};; TaxID=62928 species="Bacteria; Proteobacteria
Succinyl-CoA ligase [ADP-forming] subunit alpha n=1 Tax=Azoarcus sp. (strain BH72) RepID=A1KAU2_AZOSB rbh
scnpilot_p_inoc_scaffold_1165_18
Hydrogenophaga sp. PBC, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22576..23739)
DNA (1164bp) protein (388aa)
Succinyl-CoA ligase [ADP-forming] subunit beta {ECO:0000256|HAMAP-Rule:MF_00558}; EC=6.2.1.5 {ECO:0000256|HAMAP-Rule:MF_00558};; Succinyl-CoA synthetase subunit beta {ECO:0000256|HAMAP-Rule:MF_00558};
Succinyl-CoA ligase [ADP-forming] subunit beta n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MG12_9BURK rbh
sucC; succinyl-CoA synthetase subunit beta
scnpilot_p_inoc_scaffold_1165_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23907..24839
DNA (933bp) protein (311aa)
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38); K00145 N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38] id=12550722 bin=BDI species=Chryseobacterium taeanense genus=Chryseobacterium taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=BDI organism_group=Betaproteobacteria rbh
N-acetyl-gamma-glutamyl-phosphate reductase (EC:1.2.1.38)
scnpilot_p_inoc_scaffold_1165_20
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24898..25350)
DNA (453bp) protein (151aa)
Regulatory protein RecX n=1 Tax=Acidovorax sp. NO-1 RepID=H0BUQ0_9BURK
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovora
regulatory protein recx
scnpilot_p_inoc_scaffold_1165_21
Acidovorax citrulli, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(25418..25873)
DNA (456bp) protein (152aa)
Protein RecA n=2 Tax=Acidovorax RepID=A1TW37_ACIAC
recombination protein RecA
Protein RecA {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; Recombinase A {ECO:0000256|HAMAP-Rule:MF_00268, ECO:0000256|RuleBase:RU000526}; TaxID=397945 species="Bacteria; Proteobac
Displaying 21 items

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