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scnpilot_p_inoc_scaffold_1306

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Displaying items 1-30 of 35 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1306_1
Methylibium sp. T29, Methylibium, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..118
DNA (117bp) protein (39aa)
elongation factor Tu n=1 Tax=Burkholderia sp. JPY251 RepID=UPI000374DB53
translation elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1430884 species="Bacteria; Proteobacteria; Betaproteobacter
scnpilot_p_inoc_scaffold_1306_2
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


145..456
DNA (312bp) protein (104aa)
30S ribosomal protein S10 n=7 Tax=Comamonadaceae RepID=RS10_VEREI
rpsJ; 30S ribosomal protein S10
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delaf
scnpilot_p_inoc_scaffold_1306_3
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


671..1345
DNA (675bp) protein (225aa)
50S ribosomal protein L3 n=1 Tax=Acidovorax avenae RepID=UPI0002E9A39E
rplC; 50S ribosomal protein L3
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovor
scnpilot_p_inoc_scaffold_1306_4
Acidovorax avenae, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1345..1965
DNA (621bp) protein (207aa)
50S ribosomal protein L4/L1e; K02926 large subunit ribosomal protein L4 id=12553580 bin=BDI species=Acidovorax avenae genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
50S ribosomal protein L4/L1e
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=643561 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax avenae
scnpilot_p_inoc_scaffold_1306_5
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


1962..2276
DNA (315bp) protein (105aa)
50S ribosomal protein L23 n=4 Tax=Comamonadaceae RepID=A1W2Q9_ACISJ
50S ribosomal protein L25
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
scnpilot_p_inoc_scaffold_1306_6
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


2280..3104
DNA (825bp) protein (275aa)
50S ribosomal protein L2 n=2 Tax=Alicycliphilus denitrificans RepID=E8TVI0_ALIDB
50S ribosomal protein L2
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilu
scnpilot_p_inoc_scaffold_1306_7
Delftia sp. Cs1-4, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3117..3392
DNA (276bp) protein (92aa)
30S ribosomal protein S19 n=4 Tax=Delftia RepID=RS19_DELAS
rpsS; 30S ribosomal protein S19
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=742013 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia sp. (strain
scnpilot_p_inoc_scaffold_1306_8
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


3403..3735
DNA (333bp) protein (111aa)
50S ribosomal protein L22 n=2 Tax=Acidovorax RepID=F0Q4G3_ACIAP
50S ribosomal protein L22
50S ribosomal protein L22 {ECO:0000256|HAMAP-Rule:MF_01331, ECO:0000256|RuleBase:RU004008}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovor
scnpilot_p_inoc_scaffold_1306_9
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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3752..4618
DNA (867bp) protein (289aa)
30S ribosomal protein S3 n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MB79_ACIET rbh
rpsC; 30S ribosomal protein S3
30S ribosomal protein S3 {ECO:0000256|HAMAP-Rule:MF_01309}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus
scnpilot_p_inoc_scaffold_1306_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4621..5037
DNA (417bp) protein (139aa)
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 id=12553586 bin=BDI species=unknown genus=Polaromonas taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
rplP; 50S ribosomal protein L16; K02878 large subunit ribosomal protein L16 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
50S ribosomal protein L16
scnpilot_p_inoc_scaffold_1306_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5054..5260
DNA (207bp) protein (69aa)
50S ribosomal protein L29 n=2 Tax=Alicycliphilus denitrificans RepID=E8TVI5_ALIDB
50S ribosomal protein L29
50S ribosomal protein L29 {ECO:0000256|HAMAP-Rule:MF_00374}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphi
scnpilot_p_inoc_scaffold_1306_12
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


5270..5539
DNA (270bp) protein (90aa)
30S ribosomal protein S17 n=2 Tax=Acidovorax RepID=RS17_ACIET
rpsQ; 30S ribosomal protein S17
30S ribosomal protein S17 {ECO:0000255|HAMAP-Rule:MF_01345}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreu
scnpilot_p_inoc_scaffold_1306_13
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5646..6158
DNA (513bp) protein (171aa)
Redoxin domain protein n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MB83_ACIET
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ACM31767.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax ebreus (stra
scnpilot_p_inoc_scaffold_1306_14
Acidovorax sp. KKS102, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6252..6740)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Delftia acidovorans CCUG 15835 RepID=S2WGH0_DELAC
N-acetyltransferase GCN5
GCN5-like N-acetyltransferase {ECO:0000313|EMBL:AFU44107.1}; TaxID=358220 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp. K
scnpilot_p_inoc_scaffold_1306_15
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6822..7382)
DNA (561bp) protein (187aa)
redoxin domain-containing protein id=12550531 bin=BDI tax=BDI organism_group=Betaproteobacteria
Redoxin {ECO:0000313|EMBL:KJA10916.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
redoxin domain-containing protein
scnpilot_p_inoc_scaffold_1306_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7520..7993
DNA (474bp) protein (158aa)
PTS system fructose subfamily transporter subunit IIA; K02821 PTS system, ascorbate-specific IIA component [EC:2.7.1.69] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
PTS system fructose subfamily IIA component n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6B8_ACIDE
PTS system fructose subfamily transporter subunit IIA
scnpilot_p_inoc_scaffold_1306_17
Acidovorax sp. NO-1, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7962..8231
DNA (270bp) protein (90aa)
Phosphotransferase system, phosphocarrier protein HPr n=1 Tax=Acidovorax sp. NO-1 RepID=H0C296_9BURK
Phosphotransferase system, phosphocarrier protein HPr {ECO:0000313|EMBL:EHL21275.1}; TaxID=512030 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;"
PTS system phosphocarrier protein HPr
scnpilot_p_inoc_scaffold_1306_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8269..10029
DNA (1761bp) protein (587aa)
phosphoenolpyruvate-protein phosphotransferase id=12550526 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
phosphoenolpyruvate-protein phosphotransferase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
phosphoenolpyruvate-protein phosphotransferase
scnpilot_p_inoc_scaffold_1306_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10077..10910)
DNA (834bp) protein (278aa)
hypothetical protein id=12551382 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1306_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10920..11666)
DNA (747bp) protein (249aa)
AraC family transcriptional regulator n=1 Tax=Acidovorax radicis RepID=UPI0002377FFD
cupin Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
cupin
scnpilot_p_inoc_scaffold_1306_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11691..12671)
DNA (981bp) protein (327aa)
lipoic acid synthetase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] id=12551381 bin=BDI species=Alicycliphilus denitrificans genus=Alicycliphilus taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
lipoic acid synthetase (EC:2.8.1.8); K03644 lipoic acid synthetase [EC:2.8.1.8] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
lipoyl synthase
scnpilot_p_inoc_scaffold_1306_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12680..13369)
DNA (690bp) protein (230aa)
lipoate-protein ligase B (EC:2.3.1.181) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
lipoate-protein ligase B (EC:2.3.1.181) id=12551380 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
lipoate-protein ligase B (EC:2.3.1.181)
scnpilot_p_inoc_scaffold_1306_23
Hylemonella gracilis, Hylemonella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13383..13679)
DNA (297bp) protein (99aa)
UPF0250 protein HGR_03842 n=1 Tax=Hylemonella gracilis ATCC 19624 RepID=F3KQP5_9BURK
UPF0250 protein HGR_03842 {ECO:0000256|HAMAP-Rule:MF_00659}; TaxID=887062 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hylemonella.;" source="Hylemonella gra
hypothetical protein
scnpilot_p_inoc_scaffold_1306_24
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13927..14394
DNA (468bp) protein (156aa)
ATP synthase subunit I; K02116 ATP synthase protein I id=12551378 bin=BDI species=Acidovorax sp. MR-S7 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ATP synthase subunit I; K02116 ATP synthase protein I Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ATP synthase subunit I
scnpilot_p_inoc_scaffold_1306_25
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14418..15281
DNA (864bp) protein (288aa)
ATP synthase subunit a n=2 Tax=Alicycliphilus denitrificans RepID=E8TVJ9_ALIDB rbh
ATP synthase F0 subunit A
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
scnpilot_p_inoc_scaffold_1306_26
GWA2_Curvibacter_64_110_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15336..15584
DNA (249bp) protein (83aa)
F-ATPase, C chain; K02110 F-type H+-transporting ATPase subunit c [EC:3.6.3.14] Tax=GWA2_Curvibacter_64_110_curated
ATP synthase subunit c n=9 Tax=cellular organisms RepID=ATPL_ACIET
F0F1 ATP synthase subunit C
scnpilot_p_inoc_scaffold_1306_27
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15622..16092
DNA (471bp) protein (157aa)
F0F1 ATP synthase subunit B (EC:3.6.3.14) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
F0F1 ATP synthase subunit B (EC:3.6.3.14)
ATP synthase subunit b n=1 Tax=Acidovorax sp. KKS102 RepID=K0HYP4_9BURK
scnpilot_p_inoc_scaffold_1306_28
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16104..16646
DNA (543bp) protein (181aa)
F0F1 ATP synthase subunit delta (EC:3.6.3.14) id=12551374 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
F0F1 ATP synthase subunit delta (EC:3.6.3.14) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
F0F1 ATP synthase subunit delta
scnpilot_p_inoc_scaffold_1306_29
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16690..18249
DNA (1560bp) protein (520aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=2 Tax=Alicycliphilus denitrificans RepID=E8TVK3_ALIDB rbh
ATP synthase F1 subunit alpha
scnpilot_p_inoc_scaffold_1306_30
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18268..19134
DNA (867bp) protein (289aa)
f0f1 ATP synthase subunit gamma (EC:3.6.3.14)
ATP synthase gamma chain n=2 Tax=Acidovorax RepID=ATPG_ACIET rbh
ATP synthase gamma chain {ECO:0000255|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000255|HAMAP-Rule:MF_00815}; TaxID=5352
Displaying items 1-30 of 35 in total

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