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scnpilot_p_inoc_scaffold_1737

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Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1737_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

896..1390
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TA21_ACIDE
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1737_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1528..2364
DNA (837bp) protein (279aa)
hypothetical protein id=12551810 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1737_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2562..3431
DNA (870bp) protein (290aa)
LuxR family transcriptional regulator; K02479 two-component system, NarL family, response regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
LuxR family transcriptional regulator; K02479 two-component system, NarL family, response regulator id=12550137 bin=BDI species=Thauera sp. 63 genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_1737_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3664..5661
DNA (1998bp) protein (666aa)
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
methyl-accepting chemotaxis sensory transducer id=12552904 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
methyl-accepting chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_1737_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5658..10184
DNA (4527bp) protein (1509aa)
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase id=12552906 bin=BDI species=Methylosarcina fibrata genus=Methylosarcina taxon_order=Methylococcales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_1737_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10135..11439)
DNA (1305bp) protein (435aa)
D-amino-acid dehydrogenase id=12552907 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
D-amino-acid dehydrogenase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
D-amino-acid dehydrogenase
scnpilot_p_inoc_scaffold_1737_7
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11811..12200)
DNA (390bp) protein (130aa)
Uncharacterized protein n=1 Tax=Acidovorax delafieldii 2AN RepID=C5TBQ1_ACIDE
Uncharacterized protein {ECO:0000313|EMBL:EER58098.1}; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Aci
hypothetical protein
scnpilot_p_inoc_scaffold_1737_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12416..13489
DNA (1074bp) protein (358aa)
hypothetical protein id=12552921 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1737_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13570..13959
DNA (390bp) protein (130aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12552922 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein
scnpilot_p_inoc_scaffold_1737_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14147..15361
DNA (1215bp) protein (405aa)
extracellular ligand-binding receptor id=12552924 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
extracellular ligand-binding receptor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
extracellular ligand-binding receptor
scnpilot_p_inoc_scaffold_1737_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15383..15952)
DNA (570bp) protein (190aa)
LuxR family transcriptional regulator id=12552925 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
LuxR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
LuxR family transcriptional regulator
scnpilot_p_inoc_scaffold_1737_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16038..17114)
DNA (1077bp) protein (359aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Alicycliphilus denitrificans (strain DSM 14773 / CIP 107495 / K601) RepID=F4G7J9_ALIDK
scnpilot_p_inoc_scaffold_1737_13
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17181..17672
DNA (492bp) protein (164aa)
UspA domain-containing protein id=12549659 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
UspA domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
UspA domain-containing protein
scnpilot_p_inoc_scaffold_1737_14
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17669..18055)
DNA (387bp) protein (129aa)
hypothetical protein id=12552792 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_1737_15
Acidovorax temperans, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18237..19415)
DNA (1179bp) protein (393aa)
phospholipase n=1 Tax=Acidovorax radicis RepID=UPI0002377FD7
Phospholipase {ECO:0000313|EMBL:KJA10703.1}; TaxID=80878 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax temperans.;"
phospholipase A1
scnpilot_p_inoc_scaffold_1737_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19479..21548)
DNA (2070bp) protein (690aa)
UvrD/REP helicase n=1 Tax=Acidovorax sp. NO-1 RepID=H0BTU6_9BURK
UvrD/REP helicase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
UvrD/REP helicase
scnpilot_p_inoc_scaffold_1737_17
RBG_13_Deltaproteobacteria_43_22_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21774..22601
DNA (828bp) protein (276aa)
acid phosphatase; K09474 acid phosphatase (class A) [EC:3.1.3.2] Tax=RBG_13_Deltaproteobacteria_43_22_curated
PhoC n=1 Tax=uncultured bacterium RepID=Q2PT43_9BACT rbh
acid phosphatase
scnpilot_p_inoc_scaffold_1737_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22910..23713)
DNA (804bp) protein (268aa)
Uncharacterized protein id=12552796 bin=BDI species=Acidovorax sp. CF316 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
scnpilot_p_inoc_scaffold_1737_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23714..24094)
DNA (381bp) protein (127aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein id=12552797 bin=BDI species=Acidovorax radicis genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
scnpilot_p_inoc_scaffold_1737_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24096..25172
DNA (1077bp) protein (359aa)
transporter n=1 Tax=Acidovorax radicis RepID=UPI0002377FD3
auxin efflux carrier Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
auxin efflux carrier
scnpilot_p_inoc_scaffold_1737_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25244..27424)
DNA (2181bp) protein (727aa)
primosomal protein N'''' n=1 Tax=Acidovorax radicis RepID=UPI0002377C66
primosomal protein N' Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
primosomal protein N'
scnpilot_p_inoc_scaffold_1737_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27963..28667)
DNA (705bp) protein (235aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37) id=12549643 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Displaying 22 items

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