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scnpilot_p_inoc_scaffold_2008

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2008_1
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2..520
DNA (519bp) protein (173aa)
Methyl-accepting chemotaxis protein n=1 Tax=Acidovorax sp. CF316 RepID=J1EDL1_9BURK
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EJE50364.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;
methyl-accepting chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_2008_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(552..923)
DNA (372bp) protein (124aa)
methyl-accepting chemotaxis sensory transducer Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
chemotaxis sensory transducer; K05874 methyl-accepting chemotaxis protein I, serine sensor receptor id=12551791 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
methyl-accepting chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_2008_3
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(866..2008)
DNA (1143bp) protein (381aa)
Methyl-accepting chemotaxis sensory transducer n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6Q0_ACIDE
chemotaxis sensory transducer; K05874 methyl-accepting chemotaxis protein I, serine sensor receptor Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
methyl-accepting chemotaxis sensory transducer
scnpilot_p_inoc_scaffold_2008_4
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(2026..4209)
DNA (2184bp) protein (728aa)
Diguanylate cyclase/phosphodiesterase with extracellular sensor n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6Q1_ACIDE
extracellular sensor-containing diguanylate cyclase/phosphodiesterase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
extracellular sensor-containing diguanylate cyclase/phosphodiesterase
scnpilot_p_inoc_scaffold_2008_5
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(4529..5161)
DNA (633bp) protein (211aa)
response regulator receiver and ANTAR domain-containing protein; K07183 response regulator NasT id=12551794 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
response regulator receiver and ANTAR domain-containing protein; K07183 response regulator NasT Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
response regulator receiver and ANTAR domain-containing protein
scnpilot_p_inoc_scaffold_2008_6
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(5106..7049)
DNA (1944bp) protein (648aa)
signal transduction histidine kinase id=12551795 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
signal transduction histidine kinase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
pas sensor protein
scnpilot_p_inoc_scaffold_2008_7
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7107..8117)
DNA (1011bp) protein (337aa)
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] id=12551796 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
delta-aminolevulinic acid dehydratase (EC:4.2.1.24); K01698 porphobilinogen synthase [EC:4.2.1.24] Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
porphobilinogen synthase (EC:4.2.1.24)
scnpilot_p_inoc_scaffold_2008_8
Comamonadaceae bacterium A1, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8348..8776
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MSI4_9BURK
predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:BAO81981.1}; TaxID=1458425 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae.;" source="Comamonadaceae bacterium A1.;"
scnpilot_p_inoc_scaffold_2008_9
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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8790..9887
DNA (1098bp) protein (366aa)
teicoplanin resistance protein VanZ n=1 Tax=Acidovorax sp. MR-S7 RepID=UPI00035F8B43
vanz family protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
VanZ family protein
scnpilot_p_inoc_scaffold_2008_10
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9897..10253
DNA (357bp) protein (119aa)
ferredoxin, 2Fe-2S-like id=12551798 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
ferredoxin, 2Fe-2S-like Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ferredoxin-like protein
scnpilot_p_inoc_scaffold_2008_11
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10334..10954
DNA (621bp) protein (207aa)
hypothetical protein; K07018 id=12551799 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
hypothetical protein; K07018 Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_2008_12
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10951..12168
DNA (1218bp) protein (406aa)
Serine-type D-Ala-D-Ala carboxypeptidase {ECO:0000313|EMBL:EER59198.1}; EC=3.4.16.4 {ECO:0000313|EMBL:EER59198.1};; Flags: Precursor;; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteri
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8K2_ACIDE
beta-lactamase
scnpilot_p_inoc_scaffold_2008_13
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12294..12671
DNA (378bp) protein (126aa)
30S ribosomal protein S12 n=2 Tax=Acidovorax RepID=RS12_ACIAC
30S ribosomal protein S12-like Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
rpsL; 30S ribosomal protein S12
scnpilot_p_inoc_scaffold_2008_14
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


12835..13308
DNA (474bp) protein (158aa)
30S ribosomal protein S7 n=2 Tax=Alicycliphilus denitrificans RepID=E8TVH3_ALIDB
30S ribosomal protein S7
30S ribosomal protein S7 {ECO:0000256|HAMAP-Rule:MF_00480}; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilu
scnpilot_p_inoc_scaffold_2008_15
Alicycliphilus denitrificans, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13396..15504
DNA (2109bp) protein (703aa)
Elongation factor G n=2 Tax=Alicycliphilus denitrificans RepID=E8TVH4_ALIDB rbh
Elongation factor G {ECO:0000256|HAMAP-Rule:MF_00054}; Short=EF-G {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=596153 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadacea
translation elongation factor g
scnpilot_p_inoc_scaffold_2008_16
Massilia sp. JS1662, Massilia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists


15789..15917
DNA (129bp) protein (43aa)
elongation factor Tu n=2 Tax=Duganella zoogloeoides RepID=UPI000370EC83
Elongation factor Tu {ECO:0000256|RuleBase:RU004061}; Flags: Fragment;; TaxID=1519190 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Massilia.;" source="Mass
translation elongation factor tu
Displaying 16 items

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