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scnpilot_p_inoc_scaffold_188_10

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 6281..6787

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma-70 factor, ECF subfamily n=2 Tax=Delftia acidovorans RepID=S2WSQ0_DELAC similarity UNIREF
DB: UNIREF100
  • Identity: 71.2
  • Coverage: 177.0
  • Bit_score: 240
  • Evalue 9.40e-61
ECF subfamily RNA polymerase sigma-24 factor; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 90.5
  • Coverage: 168.0
  • Bit_score: 300
  • Evalue 1.40e-78
ECF subfamily RNA polymerase sigma-24 factor similarity KEGG
DB: KEGG
  • Identity: 67.5
  • Coverage: 191.0
  • Bit_score: 238
  • Evalue 1.00e-60

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Taxonomy

RLO_Burkholderiales_64_33 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 507
ATGGACCACCACCGGATCATCGACCACGTGCCCGCCCTGCGGCGCTACGCGCGCGTGCTCACGGGCGACGCCTGGGCCGCCGACGATCTGGTGCAGGACACCCTGGAGCGCGCCTGCCGCAAATGGCTGCTCTGGCGCACGGGCAGCAATCTGCGCGCCTGGCTGTTCACGCTGATGCACCACCTCTACCTGAACCAGCGGCGCAGCGCCCCGCCCTTGCAGGTGGTCGATATCGACACCCTGCACGAGGGACTGCAGGCACCCGCCCGCGACACGGACGGCGCGCTGGACCTTGAACGCTGCCTGCTGCGCCTGCCGGCCGAGCAGCGCGCCGTGCTGCTGCTCGTGGCCCTGGAAGACATGGCCTATGCCGACGCCGCGCGCGTGCTGCAAATCCCCGTGGGCACGGTCATGTCGCGGCTGGCGCGCGCCCGCGCCCGCCTGCGCGAACTCATGGACCCGGCCACGGCGCAGGCCCCGGCCCCTGCCCTGCGCCGGCTCAAATGA
PROTEIN sequence
Length: 169
MDHHRIIDHVPALRRYARVLTGDAWAADDLVQDTLERACRKWLLWRTGSNLRAWLFTLMHHLYLNQRRSAPPLQVVDIDTLHEGLQAPARDTDGALDLERCLLRLPAEQRAVLLLVALEDMAYADAARVLQIPVGTVMSRLARARARLRELMDPATAQAPAPALRRLK*