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scnpilot_p_inoc_scaffold_600_27

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(25820..26515)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC63_PELHB similarity UNIREF
DB: UNIREF100
  • Identity: 31.8
  • Coverage: 201.0
  • Bit_score: 114
  • Evalue 1.80e-22
transcriptional regulator, TetR family Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 34.5
  • Coverage: 197.0
  • Bit_score: 117
  • Evalue 3.00e-23
transcriptional regulator, TetR family similarity KEGG
DB: KEGG
  • Identity: 31.8
  • Coverage: 201.0
  • Bit_score: 114
  • Evalue 5.10e-23

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Taxonomy

R_Betaproteobacteria_64_12 → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 696
ATGGAATCCAAAAAAGTGAAAGCAATCGATCGGATGGCACCAAGAGTCAGTTCCTCTGTCTCGAATGAAGAGCGCAGACAGCGCAGCACGTCTCTCATTCTGGACGCGGCTGAGCGTCTCTTCGTCGAATCGGGTTACGCCGCAACCTCGGTGGAGCGCATCGCAGCCGAGGCGGGTTTAACAAAGGGAGCGATCTACTTTTACTATTCGAACAAGGAAGGGTTGCTCGATGCGCTAATTGCGCGTTCGGAGGAGAGTGCCTTTACACCACCGTTGGAAATTCTTGCCGAGCGTGGCCGACCAGCGCTTGACCGGATCATCCAGTATTTCAATTACCACGGCGCTAGCATCGCCAATGCACGAAGCTATCTTGTGCCGGTAACGGTGCTGCTGCAGCTCGACGCCATTCCATCCGCCGCCCGGGAGCGGGCGACAGCACTGTTCGCTAAGGTCCAGACTCGAATCGCTGATGTAATTGCCGAAGGTCAGGCGGCTGGTGAAGTGGCTCGAGTTGTCCGTCCGCGCGAAGCGGCCGCACTCATACAGGCCTTGATCGAAGGCATGCTGCTGCAGTGGTTGCGCCGTGCTCCCGGCTTTGACGGGAATGAATTTCTGCGTACGGGGCGGCGCGCACTACTCGCAGGGCTGCGTCTCAACTCGCATGATGGCGCTGACGCCTCCACCATTGGCCGCTGA
PROTEIN sequence
Length: 232
MESKKVKAIDRMAPRVSSSVSNEERRQRSTSLILDAAERLFVESGYAATSVERIAAEAGLTKGAIYFYYSNKEGLLDALIARSEESAFTPPLEILAERGRPALDRIIQYFNYHGASIANARSYLVPVTVLLQLDAIPSAARERATALFAKVQTRIADVIAEGQAAGEVARVVRPREAAALIQALIEGMLLQWLRRAPGFDGNEFLRTGRRALLAGLRLNSHDGADASTIGR*