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scnpilot_p_inoc_scaffold_600

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_600_1
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

138..899
DNA (762bp) protein (254aa)
Putative uncharacterized protein n=1 Tax=Ectothiorhodospira sp. PHS-1 RepID=H1G050_9GAMM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGG93078.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testosteroni (Ps
hypothetical protein
scnpilot_p_inoc_scaffold_600_2
Pseudomonas poae, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1265..1576
DNA (312bp) protein (104aa)
cupin n=1 Tax=Burkholderia kururiensis RepID=UPI000346B0D7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGE26457.1}; TaxID=1282356 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas poae
scnpilot_p_inoc_scaffold_600_3
RIFOXYC12_FULL_Burkholderiales_65_23_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1825..2403
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=gamma proteobacterium HdN1 RepID=E1VHJ5_9GAMM
hypothetical protein Tax=RIFOXYC12_FULL_Burkholderiales_65_23_curated
hypothetical protein
scnpilot_p_inoc_scaffold_600_4
Thauera sp. 27, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2447..2785
DNA (339bp) protein (113aa)
hypothetical protein id=12495453 bin=THIO_HI species=Ideonella sp. B508-1 genus=Ideonella taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:ENO82003.1}; TaxID=305700 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. 27.;"
hypothetical protein
scnpilot_p_inoc_scaffold_600_5
Thauera terpenica, Thauera, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2797..3780
DNA (984bp) protein (328aa)
cation diffusion facilitator family transporter id=12495454 bin=THIO_HI species=Thauera phenylacetica genus=Thauera taxon_order=Rhodocyclales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
Uncharacterized protein {ECO:0000313|EMBL:EPZ14167.1}; TaxID=1348657 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera terpenica 58Eu.;"
cation diffusion facilitator family transporter
scnpilot_p_inoc_scaffold_600_6
Hydrogenophaga sp. T4, Hydrogenophaga, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3777..4094
DNA (318bp) protein (106aa)
hypothetical protein; K09771 hypothetical protein id=12495455 bin=THIO_HI species=unknown genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_HI organism_group=Betaproteobacteria
UPF0060 membrane protein Y695_00958 {ECO:0000256|HAMAP-Rule:MF_00010}; TaxID=1437444 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="H
hypothetical protein
scnpilot_p_inoc_scaffold_600_7
Nitrosomonas europaea, Nitrosomonas, Nitrosomonadales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4116..5315
DNA (1200bp) protein (400aa)
General substrate transporters n=1 Tax=Nitrosomonas europaea (strain ATCC 19718 / NBRC 14298) RepID=Q82S66_NITEU
general substrate transporters
General substrate transporters {ECO:0000313|EMBL:CAD86404.1}; TaxID=228410 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosomonas.;" source="Nitrosomo
scnpilot_p_inoc_scaffold_600_8
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5331..5573)
DNA (243bp) protein (81aa)
hypothetical protein id=12552929 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_600_9
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5674..5979
DNA (306bp) protein (102aa)
Cytochrome c class I n=2 Tax=Alicycliphilus denitrificans RepID=E8U0L2_ALIDB
cytochrome c class I
Cytochrome c-551 {ECO:0000313|EMBL:GAO21211.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliphilus sp. B1.;"
scnpilot_p_inoc_scaffold_600_10
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6140..8134)
DNA (1995bp) protein (665aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
Acetyl-coenzyme A synthetase n=1 Tax=Acidovorax ebreus (strain TPSY) RepID=B9MF98_ACIET rbh
acetate/CoA ligase
scnpilot_p_inoc_scaffold_600_11
Acidovorax sp. JS42, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8258..9217)
DNA (960bp) protein (320aa)
2-nitropropane dioxygenase, NPD n=1 Tax=Acidovorax sp. (strain JS42) RepID=A1W9M3_ACISJ rbh
2-nitropropane dioxygenase
2-nitropropane dioxygenase, NPD {ECO:0000313|EMBL:ABM42948.1}; TaxID=232721 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax sp.
scnpilot_p_inoc_scaffold_600_12
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9328..11118)
DNA (1791bp) protein (597aa)
acyl-CoA dehydrogenase-like protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
acyl-CoA dehydrogenase-like protein id=12552471 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
acyl-CoA dehydrogenase-like protein
scnpilot_p_inoc_scaffold_600_13
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11142..11585)
DNA (444bp) protein (148aa)
hemerythrin HHE cation binding domain-containing protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
scnpilot_p_inoc_scaffold_600_14
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11670..12602)
DNA (933bp) protein (311aa)
electron transfer flavoprotein subunit beta n=1 Tax=Comamonas testosteroni RepID=UPI00030DC219 rbh
Electron transfer flavoprotein subunit beta {ECO:0000313|EMBL:KGG83089.1}; TaxID=285 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamo
electron transfer flavoprotein subunit beta rbh
scnpilot_p_inoc_scaffold_600_15
Acidovorax ebreus, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12623..13372)
DNA (750bp) protein (250aa)
Electron transfer flavoprotein beta-subunit n=2 Tax=Acidovorax RepID=A1W9M6_ACISJ rbh
electron transfer flavoprotein alpha/beta-subunit
Electron transfer flavoprotein alpha/beta-subunit {ECO:0000313|EMBL:ACM34445.1}; TaxID=535289 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" sour
scnpilot_p_inoc_scaffold_600_16
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13543..14844)
DNA (1302bp) protein (434aa)
mechanosensitive ion channel protein MscS Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
mechanosensitive ion channel protein MscS id=12549742 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria
mechanosensitive ion channel protein MscS
scnpilot_p_inoc_scaffold_600_17
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14844..15644)
DNA (801bp) protein (267aa)
Enoyl-CoA hydratase/isomerase n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T6G7_ACIDE
Enoyl-CoA hydratase/isomerase {ECO:0000313|EMBL:EER59939.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delaf
enoyl-CoA hydratase
scnpilot_p_inoc_scaffold_600_18
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15663..16616)
DNA (954bp) protein (318aa)
histone deacetylase superfamily protein id=12549740 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
histone deacetylase superfamily protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
histone deacetylase superfamily protein
scnpilot_p_inoc_scaffold_600_19
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16659..17579
DNA (921bp) protein (307aa)
ATPase id=12549739 bin=BDI species=Acidovorax sp. KKS102 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
ATPase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
ATPase
scnpilot_p_inoc_scaffold_600_20
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17586..18575
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=Acidovorax radicis RepID=UPI00023754C4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
hypothetical protein
scnpilot_p_inoc_scaffold_600_21
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18658..20703
DNA (2046bp) protein (682aa)
transglutaminase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
transglutaminase domain-containing protein id=12549736 bin=BDI species=Acidovorax sp. NO-1 genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
transglutaminase domain-containing protein
scnpilot_p_inoc_scaffold_600_22
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20700..21773
DNA (1074bp) protein (358aa)
lytic murein transglycosylase b Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
lytic murein transglycosylase b id=12549735 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
lytic murein transglycosylase b
scnpilot_p_inoc_scaffold_600_23
Acidovorax sp. CF316, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21795..22739)
DNA (945bp) protein (315aa)
Putative hydrolase or acyltransferase of alpha/beta superfamily n=1 Tax=Acidovorax sp. CF316 RepID=J0KIQ8_9BURK
Putative hydrolase or acyltransferase of alpha/beta superfamily {ECO:0000313|EMBL:EJE53495.1}; Flags: Precursor;; TaxID=1144317 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales;
lipase
scnpilot_p_inoc_scaffold_600_24
R_Burkholderiales_64_960, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22818..23558
DNA (741bp) protein (247aa)
AraC family transcriptional regulator n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MR05_9BURK
helix-turn-helix domain-containing protein Tax=RIFCSPHIGHO2_01_FULL_Burkholderiales_64_960_curated
helix-turn-helix domain-containing protein
scnpilot_p_inoc_scaffold_600_25
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23613..24950)
DNA (1338bp) protein (446aa)
transporter signal peptide protein id=12549728 bin=BDI species=Acidovorax delafieldii genus=Acidovorax taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=BDI organism_group=Betaproteobacteria rbh
transporter signal peptide protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
transporter signal peptide protein
scnpilot_p_inoc_scaffold_600_26
Acidovorax delafieldii, Acidovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25041..25424
DNA (384bp) protein (128aa)
Heat shock protein Hsp20 n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T9W4_ACIDE
Heat shock protein Hsp20 {ECO:0000313|EMBL:EER58734.1}; TaxID=573060 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax.;" source="Acidovorax delafieldi
heat shock protein Hsp20
scnpilot_p_inoc_scaffold_600_27
R_Betaproteobacteria_64_12, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25820..26515)
DNA (696bp) protein (232aa)
Transcriptional regulator, TetR family n=1 Tax=Pelagibacterium halotolerans (strain JCM 15775 / CGMCC 1.7692 / B2) RepID=G4RC63_PELHB
transcriptional regulator, TetR family Tax=RIFCSPLOWO2_02_FULL_Betaproteobacteria_64_12_curated
transcriptional regulator, TetR family
scnpilot_p_inoc_scaffold_600_28
Novosphingobium sp. P6W, Novosphingobium, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26571..28157
DNA (1587bp) protein (529aa)
o-succinylbenzoate--CoA ligase (EC:6.2.1.26)
hypothetical protein n=1 Tax=Actinomycetospora chiangmaiensis RepID=UPI000382BF36
Scaffold9, whole genome shotgun sequence {ECO:0000313|EMBL:KIS31551.1}; TaxID=1609758 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Novosphingobium.;" so
scnpilot_p_inoc_scaffold_600_29
Saccharomonospora azurea, Saccharomonospora, Pseudonocardiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28154..28936
DNA (783bp) protein (261aa)
Enoyl-CoA dehydratase n=1 Tax=Saccharomonospora azurea SZMC 14600 RepID=H0K4N4_9PSEU
Enoyl-CoA dehydratase {ECO:0000313|EMBL:EHK87462.1}; TaxID=1114959 species="Bacteria; Actinobacteria; Pseudonocardiales; Pseudonocardiaceae; Saccharomonospora.;" source="Saccharomonospora azurea SZMC
enoyl-CoA hydratase/isomerase
scnpilot_p_inoc_scaffold_600_30

Not on your lists

comp(28985..29521)
DNA (537bp) protein (179aa)
ISMca2 transposase OrfB n=1 Tax=uncultured bacterium RepID=C6KUL1_9BACT
ISMca2 transposase OrfB {ECO:0000313|EMBL:BAH89659.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Integrase catalytic region
Displaying items 1-30 of 57 in total

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