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scnpilot_p_inoc_scaffold_954_10

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: comp(9827..10534)

Top 3 Functional Annotations

Value Algorithm Source
conjugal transfer protein TrbF n=1 Tax=Variovorax paradoxus RepID=UPI00036C819E similarity UNIREF
DB: UNIREF100
  • Identity: 86.9
  • Coverage: 237.0
  • Bit_score: 424
  • Evalue 6.40e-116
  • rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:GAO21468.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph similarity UNIPROT
DB: UniProtKB
  • Identity: 91.5
  • Coverage: 235.0
  • Bit_score: 442
  • Evalue 4.20e-121
conjugal transfer protein TrbF similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 235.0
  • Bit_score: 411
  • Evalue 1.60e-112

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Taxonomy

Alicycliphilus sp. B1 → Alicycliphilus → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 708
ATGCGATTCAAACGACCCCAAGTGCGGTATTCGGACACGCCCGAGCCCATTACCCCCTACCAGGCCGCCGGACAGGTCTGGGACCAGCGCATCGGCTCGGCCCGGGTGCAGGCCCGGAACTGGCGACTGATGGCCTTCGGCTGTCTGTCGCTGGCCCTGCTGATGGCTGGTGGCTTGGCCTGGCGTTCGGTGCAGTCCGTCGTGACGCCGTATGTCATCGAGGTGGACCAGGCCGGGCAAGTGCGCGCCGTGGGTGAAGCTGCCACGCCTTACCAGCCCAGCGACGCACAGATCGCCTTCCACCTGGCGCGCTTCGTCACGGACGTGCGCTCGCTGTCGGTCGACCCGATCGTGGTGCGCCAGAACTGGCTCGAAGCCTATGACTACACCACGGACAAGGGTGCTGCCACGCTCAACGACTACGCGCGTGCGGCCGATCCGTTCTCGCGCATCGGGCAGCAGTCGGTGACGGTGCAGGTCAACAGCGTGGTGCGCGCTAGCGATGCCTCGTTCCAAGTGCGCTGGACCGAGCGGCGCTACGTGAACGGCGAGGCAGCCGGGCTGGAGCGTTGGACCGCCGTGTTGTCGATCGTGCTGCAGGCTCCGCGCAGCGAGGAGCGCCTGCGCAGGAACCCATTGGGCATCTACGTCAACGGCCTGTCGTGGAGCCGTGAACTCGAAACTGCTGAAGGAGTGAAGAAGCCATGA
PROTEIN sequence
Length: 236
MRFKRPQVRYSDTPEPITPYQAAGQVWDQRIGSARVQARNWRLMAFGCLSLALLMAGGLAWRSVQSVVTPYVIEVDQAGQVRAVGEAATPYQPSDAQIAFHLARFVTDVRSLSVDPIVVRQNWLEAYDYTTDKGAATLNDYARAADPFSRIGQQSVTVQVNSVVRASDASFQVRWTERRYVNGEAAGLERWTAVLSIVLQAPRSEERLRRNPLGIYVNGLSWSRELETAEGVKKP*