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scnpilot_p_inoc_scaffold_954

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_954_1
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(203..1165)
DNA (963bp) protein (321aa)
glutathione synthetase (EC:6.3.2.3) Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
glutathione synthetase (EC:6.3.2.3)
Glutathione synthetase n=1 Tax=Acidovorax sp. KKS102 RepID=K0IFM8_9BURK
scnpilot_p_inoc_scaffold_954_2
RLO_Burkholderiales_65_40, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1211..2401)
DNA (1191bp) protein (397aa)
Benzoate transporter n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T8L0_ACIDE
benzoate transporter; K05782 benzoate membrane transport protein Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_65_40_curated
benzoate transporter
scnpilot_p_inoc_scaffold_954_3
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2802..3416
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WQC5_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD40295.1}; TaxID=883101 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_p_inoc_scaffold_954_4
Delftia acidovorans, Delftia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3413..4258
DNA (846bp) protein (282aa)
Uncharacterized protein n=2 Tax=Delftia acidovorans RepID=S2WTQ2_DELAC rbh
Uncharacterized protein {ECO:0000313|EMBL:EPD43168.1}; TaxID=883100 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Delftia.;" source="Delftia acidovorans CCUG
hypothetical protein
scnpilot_p_inoc_scaffold_954_5
Oligotropha carboxidovorans, Oligotropha, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4274..5605)
DNA (1332bp) protein (444aa)
Uncharacterized protein n=3 Tax=Oligotropha carboxidovorans RepID=F8BHL2_OLICM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI05087.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxido
scnpilot_p_inoc_scaffold_954_6
Pseudomonas putida, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5674..7248
DNA (1575bp) protein (525aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida (strain GB-1) RepID=B0KKB3_PSEPG rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABY96441.1}; TaxID=76869 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas putida
scnpilot_p_inoc_scaffold_954_7
Comamonas testosteroni, Comamonas, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7271..7531)
DNA (261bp) protein (87aa)
UPI0003D79470 related cluster n=1 Tax=unknown RepID=UPI0003D79470
conjugal transfer protein
Conjugal transfer protein {ECO:0000313|EMBL:AIJ46680.1}; TaxID=1392005 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Comamonas.;" source="Comamonas testostero
scnpilot_p_inoc_scaffold_954_8
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7528..8814)
DNA (1287bp) protein (429aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036AC349 rbh
conjugal transfer protein TrbI
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_p_inoc_scaffold_954_9
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8817..9830)
DNA (1014bp) protein (338aa)
conjugal transfer protein TrbG
conjugal transfer protein TrbG/VirB9/CagX; K03204 type IV secretion system protein VirB9 id=12498577 bin=THIO_MID species=Thiobacillus denitrificans genus=Thiobacillus taxon_order=Hydrogenophilales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=THIO_MID organism_group=Betaproteobacteria
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_p_inoc_scaffold_954_10
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9827..10534)
DNA (708bp) protein (236aa)
conjugal transfer protein TrbF n=1 Tax=Variovorax paradoxus RepID=UPI00036C819E rbh
Conjugal transfer protein TrbF {ECO:0000313|EMBL:GAO21468.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
conjugal transfer protein TrbF
scnpilot_p_inoc_scaffold_954_11
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10548..11915)
DNA (1368bp) protein (456aa)
conjugal transfer protein TrbL n=1 Tax=Variovorax paradoxus RepID=UPI0003738F12 rbh
Conjugal transfer protein TrbL {ECO:0000313|EMBL:GAO21469.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
conjugal transfer protein TrbL
scnpilot_p_inoc_scaffold_954_12
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11912..12202)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI0003647B0C
hypothetical protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_p_inoc_scaffold_954_13
RIFOXYD12_FULL_Burkholderiales_59_19_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12213..12980)
DNA (768bp) protein (256aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036E3106 rbh
conjugal transfer protein TrbJ Tax=RIFOXYD12_FULL_Burkholderiales_59_19_curated
conjugal transfer protein TrbJ
scnpilot_p_inoc_scaffold_954_14
Rhodocyclaceae bacterium PG1-Ca6, Rhodocyclales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12993..15428)
DNA (2436bp) protein (812aa)
conjugal transfer protein TrbE n=1 Tax=Thiobacillus denitrificans RepID=UPI000365D4CA rbh
conjugal transfer protein TrbE
Conjugal transfer protein TrbE {ECO:0000313|EMBL:AJP47674.1}; TaxID=1565605 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae.;" source="Rhodocyclaceae bacterium PG1
scnpilot_p_inoc_scaffold_954_15
Azotobacter vinelandii, Azotobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15439..15696)
DNA (258bp) protein (86aa)
P-type conjugative transfer protein TrbD n=3 Tax=Azotobacter vinelandii RepID=C1DR59_AZOVD
trbD; P-type conjugative transfer protein TrbD
P-type conjugative transfer protein TrbD {ECO:0000313|EMBL:AGK18886.1}; TaxID=1283331 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Azotobacter.;" source="
scnpilot_p_inoc_scaffold_954_16
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15693..16025)
DNA (333bp) protein (111aa)
conjugal transfer protein TrbC n=1 Tax=Thiobacillus denitrificans RepID=UPI0003665B36
Conjugal transfer protein TrbC {ECO:0000313|EMBL:GAO21474.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Alicycliph
conjugal transfer protein TrbC
scnpilot_p_inoc_scaffold_954_17
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16022..17050)
DNA (1029bp) protein (343aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI000369BC04 rbh
P-type conjugative transfer ATPase TrbB {ECO:0000313|EMBL:GAO21475.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
conjugal transfer protein TrbB
scnpilot_p_inoc_scaffold_954_18
BJP_08E140C01_10KDA_Burkholderiales_65_51, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17034..17507)
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Variovorax paradoxus RepID=UPI00036FE761
CopG/DNA-binding domain-containing protein
Tax=BJP_08E140C01_10KDA_Burkholderiales_65_51
scnpilot_p_inoc_scaffold_954_19
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17504..19516)
DNA (2013bp) protein (671aa)
conjugal transfer protein TraG n=1 Tax=Thiobacillus denitrificans RepID=UPI00035C7ECF
Conjugal transfer coupling protein TraG {ECO:0000313|EMBL:GAO21477.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="A
conjugal transfer protein TraG
scnpilot_p_inoc_scaffold_954_20
Alicycliphilus sp. B1, Alicycliphilus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19786..20673)
DNA (888bp) protein (296aa)
Transcriptional regulator, LysR family n=1 Tax=Acidovorax delafieldii 2AN RepID=C5T7Q3_ACIDE rbh
Transcriptional regulator, LysR family {ECO:0000313|EMBL:GAO21484.1}; TaxID=1603291 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Alicycliphilus.;" source="Al
D-alanyl-D-alanine endopeptidase
scnpilot_p_inoc_scaffold_954_21
RLO_Burkholderiales_64_33, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20770..22431)
DNA (1662bp) protein (554aa)
long-chain fatty acid--CoA ligase n=1 Tax=Acidovorax radicis RepID=UPI0002375FE2
long-chain-fatty-acid--CoA ligase Tax=RIFCSPLOWO2_12_FULL_Burkholderiales_64_33_curated
long-chain-fatty-acid--CoA ligase
scnpilot_p_inoc_scaffold_954_22
Pseudomonas denitrificans, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22670..23575
DNA (906bp) protein (302aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI000369AF01
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AGI26439.1}; TaxID=1294143 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pse
scnpilot_p_inoc_scaffold_954_23
Burkholderia glumae, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23576..24577)
DNA (1002bp) protein (334aa)
ansB1; glutaminase-asparaginase (EC:3.5.1.38)
Glutaminase-asparaginase {ECO:0000313|EMBL:AJK45190.1}; EC=3.5.1.38 {ECO:0000313|EMBL:AJK45190.1};; TaxID=595500 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiacea
Glutamine-asparaginase n=2 Tax=Burkholderia multivorans RepID=B9BAR3_9BURK
scnpilot_p_inoc_scaffold_954_24
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24711..26294
DNA (1584bp) protein (528aa)
hypothetical protein n=1 Tax=Curvibacter lanceolatus RepID=UPI00037A6D9E
putative peptide ABC transporter, peptide-binding protein
Putative peptide ABC transporter, peptide-binding protein {ECO:0000313|EMBL:AGU50798.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovora
scnpilot_p_inoc_scaffold_954_25
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26307..27248
DNA (942bp) protein (314aa)
peptide ABC transporter n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002F6ADB3 rbh
putative peptide ABC transporter, permease protein
Putative peptide ABC transporter, permease protein {ECO:0000313|EMBL:AGU50797.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so
scnpilot_p_inoc_scaffold_954_26
Burkholderiaceae bacterium 16, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27259..28704
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Cupriavidus basilensis OR16 RepID=H1SAU4_9BURK
Microcystinase C {ECO:0000256|PIRNR:PIRNR012702}; Short=MlrC {ECO:0000256|PIRNR:PIRNR012702};; TaxID=1619952 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae.;"
MlrC
scnpilot_p_inoc_scaffold_954_27
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28701..29633
DNA (933bp) protein (311aa)
ABC-type dipeptide/oligopeptide/nickel transport system, permease component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WRU3_9BURK
ABC-type dipeptide/oligopeptide/nickel transport system, permease component {ECO:0000313|EMBL:EHR73390.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkho
putative peptide ABC transporter, permease protein
scnpilot_p_inoc_scaffold_954_28
Burkholderiales bacterium JOSHI_001, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29630..31273
DNA (1644bp) protein (548aa)
hypothetical protein n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002F2CFBA
ATPase component of various ABC-type transport systems with duplicated ATPase domain {ECO:0000313|EMBL:EHR73389.1}; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.
gsiA1; putative glutathione ABC transporter, ATP-binding protein GsiA
scnpilot_p_inoc_scaffold_954_29
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31278..32564
DNA (1287bp) protein (429aa)
D-amino acid dehydrogenase small subunit (EC:1.4.99.1)
D-amino acid dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01202}; EC=1.4.99.1 {ECO:0000256|HAMAP-Rule:MF_01202};; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkh
hypothetical protein n=1 Tax=Burkholderia kururiensis RepID=UPI000380E059 rbh
scnpilot_p_inoc_scaffold_954_30
Variovorax paradoxus, Variovorax, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32577..33410
DNA (834bp) protein (278aa)
Ornithine cyclodeaminase/mu-crystallin n=1 Tax=Variovorax paradoxus (strain EPS) RepID=E6V248_VARPE
ornithine cyclodeaminase/mu-crystallin
Ornithine cyclodeaminase/mu-crystallin {ECO:0000313|EMBL:ADU39127.1}; TaxID=595537 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" source="Variovo
Displaying 30 items

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