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scnpilot_p_inoc_scaffold_954_25

Organism: SCNpilot_P_inoc_Burkholderiales_67_12

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 MC: 1 ASCG 14 / 38 MC: 1
Location: 26307..27248

Top 3 Functional Annotations

Value Algorithm Source
peptide ABC transporter n=1 Tax=Limnohabitans sp. Rim28 RepID=UPI0002F6ADB3 similarity UNIREF
DB: UNIREF100
  • Identity: 70.0
  • Coverage: 317.0
  • Bit_score: 436
  • Evalue 2.80e-119
  • rbh
putative peptide ABC transporter, permease protein similarity KEGG
DB: KEGG
  • Identity: 68.1
  • Coverage: 313.0
  • Bit_score: 417
  • Evalue 3.90e-114
Putative peptide ABC transporter, permease protein {ECO:0000313|EMBL:AGU50797.1}; TaxID=1246301 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Variovorax.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 68.1
  • Coverage: 313.0
  • Bit_score: 417
  • Evalue 1.90e-113

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Taxonomy

Variovorax paradoxus → Variovorax → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 942
ATGCTTCGATACCTGCTGGGTCGTCTACTGGCGACCGTCCCCGTCCTCCTGGTGGTCGCCGTGATCGTCTTTGGAATCCTGCGACTCACGCCAGGTGACCCAGCGGCCGTCATCGCTGGCAATTCCGCGACGCCGGAAGATGTCGCTCGCATCAGGCAAAGCCTGGGATTGGAGCGACCGATCATTCACCAGTTCGTCGGCTGGATTCAACAGTTGGCACAAGGAGACATTGGGCAGTCGTACTACCTGGGGAAACCCGTTGCTGAACTGATCTCAGACCGCCTTGAGCCCACTATCTCCTTGGCGGTCGGTTCACTACTTCTCGCGATTGTGGTGGCGGTTCCCCTCGGCACATGGGCCGCGTGGCGGATGGGAGGACTTCTCGATCGAACATTGATGGCCGTTGCCGTGGCGGGCTTTTCGATACCTGTTTTCGTAGCGGGCTACGTGTTGATCCTCGCTTTTTCTCTAGGCCTGCAGTGGCTTCCCGTTCAGGGATACAGACCGTGGTCGGTCGGATTTGTGGAGTGGGCTCGGCAATTGGTTCTGCCATGGACAGCCCTGGCCATCGTCTACGTGGCGCTCCTATCACGCGTTACGCGGGCAGCGGTGAGCGAGGCACTGACCGAGGACTACATCCGCACAGCACAGGCGAAGGGGCTGCCCGCTCTGAGGATATTGCTGCGCCACGCGCTTCCGAATGCGGCGATTCCCATCGTGACAGTGATCGGCATTAGCTTTGCCATGCTGATCGGCGGCGTGGTCGTCACCGAAACCGTCTTTGCCATACCTGGCCTAGGCTCCCTTACCGTCGATGCGGTGCTGAACCGGGACTTTCCCGTTATTCAGGGCGTGGTGCTCTTCTTCTCGGCCGTGTACGTGCTTCTCAACTTGGCAATTGACTTGAGTTATGCGCTGTTCGATCCGCGCATCCGATACTGA
PROTEIN sequence
Length: 314
MLRYLLGRLLATVPVLLVVAVIVFGILRLTPGDPAAVIAGNSATPEDVARIRQSLGLERPIIHQFVGWIQQLAQGDIGQSYYLGKPVAELISDRLEPTISLAVGSLLLAIVVAVPLGTWAAWRMGGLLDRTLMAVAVAGFSIPVFVAGYVLILAFSLGLQWLPVQGYRPWSVGFVEWARQLVLPWTALAIVYVALLSRVTRAAVSEALTEDYIRTAQAKGLPALRILLRHALPNAAIPIVTVIGISFAMLIGGVVVTETVFAIPGLGSLTVDAVLNRDFPVIQGVVLFFSAVYVLLNLAIDLSYALFDPRIRY*