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scnpilot_p_inoc_scaffold_3

Search features with annotation key words

Displaying items 1-30 of 732 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_3_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1..786
DNA (786bp) protein (262aa)
tyrosine recombinase n=1 Tax=Dyadobacter beijingensis RepID=UPI000382B302 rbh
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACT96417.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain AT
scnpilot_p_inoc_scaffold_3_2
Halothermothrix orenii, Halothermothrix, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1223..2170
DNA (948bp) protein (316aa)
aldo/keto reductase (EC:1.1.1.-)
Aldo/keto reductase {ECO:0000313|EMBL:ACL69154.1}; EC=1.1.1.- {ECO:0000313|EMBL:ACL69154.1};; TaxID=373903 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix
Aldo/keto reductase n=1 Tax=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) RepID=B8D1S7_HALOH
scnpilot_p_inoc_scaffold_3_3
unknown

Not on your lists

2160..2744
DNA (585bp) protein (195aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3_4
Streptomyces scabiei, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2741..3559
DNA (819bp) protein (273aa)
SIR2 family protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS75_CLOSA
Uncharacterized protein {ECO:0000313|EMBL:KFF99570.1}; TaxID=1930 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces scabiei.;"
SIR2 family protein
scnpilot_p_inoc_scaffold_3_5
Treponema denticola, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists


3562..4113
DNA (552bp) protein (184aa)
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase n=5 Tax=Treponema denticola RepID=M2ANT4_TREDN
HAM1 protein
RdgB/HAM1 family non-canonical purine NTP pyrophosphatase {ECO:0000313|EMBL:EPF40752.1}; TaxID=999435 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema d
scnpilot_p_inoc_scaffold_3_6
unknown

Not on your lists

4110..5162
DNA (1053bp) protein (351aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3_7
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5600..6799)
DNA (1200bp) protein (400aa)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=1 Tax=Haliscomenobacter hydrossis (strain ATCC 27775 / DSM 1100 / LMG 10767 / O) RepID=F4KUE2_HALH1 rbh
hypothetical protein
scnpilot_p_inoc_scaffold_3_8
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(6801..7976)
DNA (1176bp) protein (392aa)
Nucleoside 2-deoxyribosyltransferase family protein n=1 Tax=Pseudomonas syringae pv. lachrymans str. M301315 RepID=F3EIW8_PSESL
Uncharacterized protein {ECO:0000313|EMBL:KJF43593.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp.
nucleoside 2-deoxyribosyltransferase
scnpilot_p_inoc_scaffold_3_9
unknown

Not on your lists

comp(7973..8332)
DNA (360bp) protein (120aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_3_10
Draconibacterium sp. JN14CK-3, Draconibacterium, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8362..8619)
DNA (258bp) protein (86aa)
Uncharacterized protein {ECO:0000313|EMBL:KJF43591.1}; TaxID=1544798 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prolixibacteraceae; Draconibacterium.;" source="Draconibacterium sp.
scnpilot_p_inoc_scaffold_3_11
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

9659..10417
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4C334_SPHS2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ76886.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
scnpilot_p_inoc_scaffold_3_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

10524..10793
DNA (270bp) protein (90aa)
hypothetical protein n=1 Tax=Pedobacter agri RepID=UPI00029A102C
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92199.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_3_13
Arcticibacter svalbardensis, Arcticibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10790..11113
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Arcticibacter svalbardensis MN12-7 RepID=R9GUJ7_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EOR95363.1}; TaxID=1150600 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Arcticibacter.;" source="Arcticibacter
hypothetical protein
scnpilot_p_inoc_scaffold_3_14
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11103..11471
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RVJ9_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ17063.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterella byssophila (stra
scnpilot_p_inoc_scaffold_3_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11468..12166
DNA (699bp) protein (233aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT62_DYAFD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96426.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_3_16
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12159..12683
DNA (525bp) protein (175aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VT63_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96427.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_3_17
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12820..13605
DNA (786bp) protein (262aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003617095 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT96428.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_3_18
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

13602..14447
DNA (846bp) protein (282aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003818823 rbh
relaxase/mobilization nuclease family protein
Relaxase/mobilization nuclease family protein {ECO:0000313|EMBL:ADQ17067.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbette
scnpilot_p_inoc_scaffold_3_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

14503..14976
DNA (474bp) protein (158aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003770B35
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92559.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_3_20
Pedobacter kyungheensis, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15140..16231)
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PRA1_MURRD rbh
Uncharacterized protein {ECO:0000313|EMBL:KIA91200.1}; TaxID=1069985 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter kyung
hypothetical protein
scnpilot_p_inoc_scaffold_3_21
Epilithonimonas lactis, Epilithonimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16235..17026)
DNA (792bp) protein (264aa)
RNA polymerase n=1 Tax=Gillisia marina RepID=UPI000299FAC3
RNA polymerase {ECO:0000313|EMBL:KFC20754.1}; TaxID=421072 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Epilithonimonas.;" source="Epilithonimonas lactis.;"
sigma-70 family RNA polymerase sigma factor
scnpilot_p_inoc_scaffold_3_22
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

17206..17451
DNA (246bp) protein (82aa)
Uncharacterized protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33861 RepID=D7VL97_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:EFK58370.1}; TaxID=525373 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
hypothetical protein
scnpilot_p_inoc_scaffold_3_23
R_Fluviicola_43_260, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

17886..18323
DNA (438bp) protein (146aa)
DNA mismatch endonuclease Vsr; K07458 DNA mismatch endonuclease, patch repair protein [EC:3.1.-.-] Tax=RIFCSPHIGHO2_02_FULL_Fluviicola_43_260_curated
Fis family transcriptional regulator n=1 Tax=Rudanella lutea RepID=UPI00037C204D
DNA mismatch endonuclease Vsr
scnpilot_p_inoc_scaffold_3_24
Arcobacter butzleri, Arcobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

18359..19936
DNA (1578bp) protein (526aa)
DNA methyltransferase n=1 Tax=Pedobacter agri RepID=UPI00029B428A rbh
C-5 cytosine-specific DNA methylase
C-5 cytosine-specific DNA methylase {ECO:0000313|EMBL:AGR77632.1}; TaxID=1036172 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Arcobacter.;" source="
scnpilot_p_inoc_scaffold_3_25
Pseudoalteromonas arctica, Pseudoalteromonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20027..21511
DNA (1485bp) protein (495aa)
ATP-binding protein n=1 Tax=Pseudoalteromonas arctica A 37-1-2 RepID=U1KGT0_9GAMM
ATP-binding protein {ECO:0000313|EMBL:ERG10760.1}; TaxID=1117313 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Pseudoalteromonadaceae; Pseudoalteromonas.;" source="Pseudoalt
ATP-binding protein
scnpilot_p_inoc_scaffold_3_26
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21511..24498
DNA (2988bp) protein (996aa)
Endonuclease n=1 Tax=Streptomyces cattleya (strain ATCC 35852 / DSM 46488 / JCM 4925 / NBRC 14057 / NRRL 8057) RepID=F8JQ22_STREN
Uncharacterized protein {ECO:0000313|EMBL:KJE46698.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
hypothetical protein
scnpilot_p_inoc_scaffold_3_27
Thalassomonas viridans, Thalassomonas, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24498..25457
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5EQ11_CORAD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJE46699.1}; TaxID=137584 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Colwelliaceae; Thalassomonas.;" source="Thalassomonas virid
scnpilot_p_inoc_scaffold_3_28
BJP_08E140C01_Bacteriodales_41_10, Bacteriodales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25454..27814
DNA (2361bp) protein (787aa)
Putative uncharacterized protein n=1 Tax=Shewanella piezotolerans (strain WP3 / JCM 13877) RepID=B8CUF6_SHEPW
hypothetical protein
Tax=BJP_08E140C01_Bacteriodales_41_10
scnpilot_p_inoc_scaffold_3_29
Flavobacterium hibernum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28027..28389
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Flavobacterium sp. F52 RepID=J1KYQ2_9FLAO
Strain DSM 12611 Contig21, whole genome shotgun sequence {ECO:0000313|EMBL:KIO50943.1}; TaxID=37752 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacteriu
scnpilot_p_inoc_scaffold_3_30
unknown

Not on your lists

28531..28719
DNA (189bp) protein (63aa)

This feature has no annotations

Displaying items 1-30 of 732 in total

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