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scnpilot_p_inoc_scaffold_224

Search features with annotation key words

Displaying items 1-30 of 124 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_224_1
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(51..1367)
DNA (1317bp) protein (439aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI00036B6606
integrase
Integrase family protein {ECO:0000313|EMBL:AEI49714.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 295
scnpilot_p_inoc_scaffold_224_2
unknown

Not on your lists

1913..2344
DNA (432bp) protein (144aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_3
Chthoniobacter flavus, Chthoniobacter, Spartobacteria, Verrucomicrobia, Bacteria

Not on your lists

2711..5851
DNA (3141bp) protein (1047aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000368F4D2 rbh
Heme-binding protein {ECO:0000313|EMBL:EDY19836.1}; Flags: Precursor;; TaxID=497964 species="Bacteria; Verrucomicrobia; Spartobacteria; Chthoniobacter.;" source="Chthoniobacter flavus Ellin428.;"
membrane-bound dehydrogenase
scnpilot_p_inoc_scaffold_224_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5960..7210
DNA (1251bp) protein (417aa)
transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00036D1055 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92778.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_224_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

7274..8146
DNA (873bp) protein (291aa)
Transcriptional regulator n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VRS6_DYAFD rbh
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:ACT92779.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain A
scnpilot_p_inoc_scaffold_224_6
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8309..8605)
DNA (297bp) protein (99aa)
YCII-related domain-containing protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4JZN7_CLOPA
YCII-related domain-containing protein
YCII-related domain-containing protein {ECO:0000313|EMBL:AGK95778.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteuria
scnpilot_p_inoc_scaffold_224_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

8785..9180
DNA (396bp) protein (132aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6A6_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94246.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_224_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9177..9407)
DNA (231bp) protein (77aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037A429A
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94247.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_224_9
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9488..9805)
DNA (318bp) protein (106aa)
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_p_inoc_scaffold_224_10
GWE2_Bacteroidetes_42_39_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9827..10009)
DNA (183bp) protein (61aa)
Putative uncharacterized protein id=1976284 bin=GWE2_Bacteroidetes_42_39 species=Alistipes indistinctus genus=Alistipes taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWE2_Bacteroidetes_42_39 organism_group=Bacteroidetes organism_desc=Good +
hypothetical protein Tax=GWE2_Bacteroidetes_42_39_curated
scnpilot_p_inoc_scaffold_224_11
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(9969..11141)
DNA (1173bp) protein (391aa)
Putative acetyl xylan esterase n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6A8_DYAFD rbh
putative acetyl xylan esterase
Putative acetyl xylan esterase {ECO:0000313|EMBL:ACT94248.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobac
scnpilot_p_inoc_scaffold_224_12
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11332..11679
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6A9_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94249.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_224_13
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

11927..12298
DNA (372bp) protein (124aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000364AF53
ECF subfamily RNA polymerase sigma-24 subunit
RNA polymerase, sigma-24 subunit, ECF subfamily {ECO:0000313|EMBL:ACT94250.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacte
scnpilot_p_inoc_scaffold_224_14
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12298..13755
DNA (1458bp) protein (486aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035E5532 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94251.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_224_15
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13803..16061)
DNA (2259bp) protein (753aa)
TonB-dependent receptor n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W6B2_DYAFD rbh
TonB-dependent receptor {ECO:0000313|EMBL:ACT94252.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
TonB-dependent receptor
scnpilot_p_inoc_scaffold_224_16
Runella slithyformis, Runella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16082..17224)
DNA (1143bp) protein (381aa)
Uncharacterized protein n=1 Tax=Runella slithyformis (strain ATCC 29530 / DSM 19594 / LMG 11500 / NCIMB 11436 / LSU 4) RepID=F8EGS0_RUNSL rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEI47010.1}; TaxID=761193 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Runella.;" source="Runella slithyformis (strain ATCC 2953
scnpilot_p_inoc_scaffold_224_17
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(17422..18639)
DNA (1218bp) protein (406aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037240E6 rbh
major facilitator superfamily protein rbh
Major facilitator superfamily MFS_1 {ECO:0000313|EMBL:AEE47940.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Hal
scnpilot_p_inoc_scaffold_224_18
Haliscomenobacter hydrossis, Haliscomenobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(18646..21405)
DNA (2760bp) protein (920aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037E8486 rbh
TonB-dependent receptor {ECO:0000313|EMBL:AEE47941.1}; TaxID=760192 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Saprospiraceae; Haliscomenobacter.;" source="Haliscomenobact
TonB-dependent receptor
scnpilot_p_inoc_scaffold_224_19
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(21452..22027)
DNA (576bp) protein (192aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales;
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036A57D9 rbh
carboxymuconolactone decarboxylase
scnpilot_p_inoc_scaffold_224_20
Microbispora sp. ATCC PTA-5024, Microbispora, Streptosporangiales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22124..22780)
DNA (657bp) protein (219aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=316330 species="Bacteria; Actinobacteria; Streptosporangiales; Streptosporangia
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000382E132 rbh
peroxidase family protein
scnpilot_p_inoc_scaffold_224_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(22835..23392)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003763282 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT94253.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_224_22
unknown

Not on your lists

comp(23571..23666)
DNA (96bp) protein (32aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_23
unknown

Not on your lists

23844..24269
DNA (426bp) protein (142aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_24
unknown

Not on your lists

24283..24711
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_25
Flavobacterium sp. KMS, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24726..27260
DNA (2535bp) protein (845aa)
hypothetical protein n=1 Tax=Riemerella columbina RepID=UPI000379D3C0
Peptidase M4 {ECO:0000313|EMBL:KIA97713.1}; TaxID=1566023 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium sp. KMS.;"
peptidase M4, thermolysin
scnpilot_p_inoc_scaffold_224_26
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27211..27504
DNA (294bp) protein (98aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003670B0C
carbohydrate binding family protein
Carbohydrate binding family 6 {ECO:0000313|EMBL:ACT93481.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobact
scnpilot_p_inoc_scaffold_224_27
unknown

Not on your lists

27610..28248
DNA (639bp) protein (213aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_224_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

28311..28649
DNA (339bp) protein (113aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000371587E
cupin
Cupin 2 conserved barrel domain protein {ECO:0000313|EMBL:ACT94254.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermen
scnpilot_p_inoc_scaffold_224_29
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(28684..30069)
DNA (1386bp) protein (462aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000361459E rbh
acetylgalactosaminidase
Acetylgalactosaminidase {ECO:0000313|EMBL:AKD55454.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
scnpilot_p_inoc_scaffold_224_30
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30082..31164)
DNA (1083bp) protein (361aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037AFA3E rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AKD55455.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotolerans.;"
Displaying items 1-30 of 124 in total

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