ggKbase home page

scnpilot_p_inoc_scaffold_431

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_431_1
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(96..2102)
DNA (2007bp) protein (669aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036BDC66
Conjugal transfer protein TraG {ECO:0000313|EMBL:KGO80807.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacter
type IV secretory pathway VirB4 components-like protein
scnpilot_p_inoc_scaffold_431_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2577..2900)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035EE1E4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92187.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_431_3
GWF2_Bacteroidetes_43_11_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2966..3445)
DNA (480bp) protein (160aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037D6416
hypothetical protein Tax=GWF2_Bacteroidetes_43_11_curated
scnpilot_p_inoc_scaffold_431_4
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3945..5054
DNA (1110bp) protein (370aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RX31_LEAB4 rbh
filamentation induced by camp protein fic
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:ADQ18070.1}; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterell
scnpilot_p_inoc_scaffold_431_5
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

6126..7463
DNA (1338bp) protein (446aa)
Redoxin domain protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXP2_LEAB4
redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:ADQ18106.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterell
scnpilot_p_inoc_scaffold_431_6
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

7475..10675
DNA (3201bp) protein (1067aa)
TonB-dependent receptor plug n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEI5_SPHS2
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADZ76680.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphing
scnpilot_p_inoc_scaffold_431_7
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10687..12048
DNA (1362bp) protein (454aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y342_PEDHD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU03255.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari
scnpilot_p_inoc_scaffold_431_8
unknown

Not on your lists

12064..13200
DNA (1137bp) protein (379aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_9
unknown

Not on your lists

comp(13412..13690)
DNA (279bp) protein (93aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_10
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13794..14213)
DNA (420bp) protein (140aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXP6_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ18110.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterel
scnpilot_p_inoc_scaffold_431_11
unknown

Not on your lists

comp(14372..14929)
DNA (558bp) protein (186aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003788B73
scnpilot_p_inoc_scaffold_431_12
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(14939..16129)
DNA (1191bp) protein (397aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035CA0D0
Uncharacterized protein {ECO:0000313|EMBL:KGO80800.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bei
hypothetical protein
scnpilot_p_inoc_scaffold_431_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16621..17760)
DNA (1140bp) protein (380aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003821B91
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ADB40689.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma lingual
scnpilot_p_inoc_scaffold_431_14
Spirosoma radiotolerans, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(17757..18554)
DNA (798bp) protein (266aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000382CC2E
LytTR family transcriptional regulator
LytTR family transcriptional regulator {ECO:0000313|EMBL:AKD58213.1}; TaxID=1379870 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma radiotoler
scnpilot_p_inoc_scaffold_431_15
Hymenobacter swuensis, Hymenobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(18699..21776)
DNA (3078bp) protein (1026aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003741380
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHJ95799.1}; TaxID=1227739 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Hymenobacter.;" source="Hymenobacter swuensis DY53.;"
scnpilot_p_inoc_scaffold_431_16
unknown

Not on your lists

23390..23839
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036EE788
scnpilot_p_inoc_scaffold_431_17
unknown

Not on your lists

23912..24088
DNA (177bp) protein (59aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_18
Chryseobacterium luteum, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

24100..24597
DNA (498bp) protein (166aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00035F87EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFF01461.1}; TaxID=421531 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium
scnpilot_p_inoc_scaffold_431_19
unknown

Not on your lists

24923..25063
DNA (141bp) protein (47aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26054..26710
DNA (657bp) protein (219aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036732EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93406.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_431_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

26653..27297
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036732EA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT93406.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_431_22
unknown

Not on your lists

27381..27680
DNA (300bp) protein (100aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_431_23
Fibrella aestuarina, Fibrella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

27990..28664
DNA (675bp) protein (225aa)
Putative lipoprotein n=1 Tax=Fibrella aestuarina BUZ 2 RepID=I0K212_9BACT
putative lipoprotein
Putative lipoprotein {ECO:0000313|EMBL:CCG98165.1}; TaxID=1166018 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrella.;" source="Fibrella aestuarina BUZ 2.;"
scnpilot_p_inoc_scaffold_431_24
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(30004..31662)
DNA (1659bp) protein (553aa)
Uncharacterized protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QC34_SPILD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB39769.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
scnpilot_p_inoc_scaffold_431_25
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(31631..32662)
DNA (1032bp) protein (344aa)
hypothetical protein n=1 Tax=Spirosoma luteum RepID=UPI00037BCFE0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADZ81483.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphingobact
scnpilot_p_inoc_scaffold_431_26
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(32662..32985)
DNA (324bp) protein (108aa)
Transcriptional regulator, PadR-like family n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GEU2_9BACT
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:CCH52417.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi
PadR family transcriptional regulator
scnpilot_p_inoc_scaffold_431_27
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(33326..34147)
DNA (822bp) protein (274aa)
Integrase catalytic region n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VW29_DYAFD rbh
Integrase catalytic subunit
Integrase catalytic region {ECO:0000313|EMBL:ACT93161.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain
scnpilot_p_inoc_scaffold_431_28
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(34144..34434)
DNA (291bp) protein (97aa)
Transposase IS3/IS911 family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZI1_DYAFD
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACT91793.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentan
scnpilot_p_inoc_scaffold_431_29
Flavobacterium hydatis, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(34516..36039)
DNA (1524bp) protein (508aa)
Uncharacterized protein n=1 Tax=Elizabethkingia meningoseptica ATCC 13253 = NBRC 12535 RepID=R9CJ53_ELIME
Sulfatase {ECO:0000313|EMBL:KFF18837.1}; TaxID=991 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium hydatis (Cytophaga aq
sulfatase
scnpilot_p_inoc_scaffold_431_30
Chryseobacterium piperi, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(36026..36898)
DNA (873bp) protein (291aa)
PAP2 family protein n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2FUY3_9SPHI
Phosphoesterase {ECO:0000313|EMBL:KFF21109.1}; TaxID=558152 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium piperi.;
undecaprenyl pyrophosphate phosphatase
Displaying items 1-30 of 66 in total

View Taxonomy