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scnpilot_p_inoc_scaffold_503

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_503_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

1..384
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003770B35
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92559.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_503_2
Belliella baltica, Belliella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(549..1775)
DNA (1227bp) protein (409aa)
tyrosine recombinase n=1 Tax=Cytophagales str. B6 RepID=UPI0003B4E37C
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AFL85793.1}; TaxID=866536 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cyclobacteriaceae; Belliella.;" source="Belliella baltica (strain
scnpilot_p_inoc_scaffold_503_3
Streptomyces vietnamensis, Streptomyces, Streptomycetales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2428..3063
DNA (636bp) protein (212aa)
Uncharacterized protein n=3 Tax=Myroides odoratimimus RepID=H1GJW4_9FLAO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF69107.1}; TaxID=362257 species="Bacteria; Actinobacteria; Streptomycetales; Streptomycetaceae; Streptomyces.;" source="Streptomyces vietnamensis.;"
scnpilot_p_inoc_scaffold_503_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

3636..4859
DNA (1224bp) protein (408aa)
Transposase IS116/IS110/IS902 family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VS18_DYAFD rbh
transposase IS116/IS110/IS902 family protein
Transposase IS116/IS110/IS902 family protein {ECO:0000313|EMBL:ACT94539.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter f
scnpilot_p_inoc_scaffold_503_5
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(5137..6885)
DNA (1749bp) protein (583aa)
SusD/RagB family lipoprotein n=1 Tax=Zobellia galactanivorans (strain DSM 12802 / CIP 106680 / NCIMB 13871 / Dsij) RepID=G0L932_ZOBGA rbh
Carbohydrate-binding protein SusD {ECO:0000313|EMBL:KEO75904.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
SusD/RagB family lipoprotein
scnpilot_p_inoc_scaffold_503_6
Anditalea andensis, Anditalea, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6931..10014)
DNA (3084bp) protein (1028aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI0003600480 rbh
Carbohydrate-binding protein SusC {ECO:0000313|EMBL:KEO75903.1}; TaxID=1048983 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Anditalea.;" source="Anditalea andensis.;"
TonB-dependent Receptor
scnpilot_p_inoc_scaffold_503_7
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

10205..11248
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PNM0_CHIPD rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64120.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_p_inoc_scaffold_503_8
unknown

Not on your lists

11485..12165
DNA (681bp) protein (227aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_503_9
unknown

Not on your lists

comp(12436..12978)
DNA (543bp) protein (181aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_503_10
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(13282..13659)
DNA (378bp) protein (126aa)
TonB-dependent receptor n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VZI9_DYAFD
TonB-dependent receptor
TonB-dependent receptor {ECO:0000313|EMBL:ACT93467.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_503_11
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13670..14086)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PRE5_CHIPD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU64384.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinen
scnpilot_p_inoc_scaffold_503_12
unknown

Not on your lists

comp(14421..14897)
DNA (477bp) protein (159aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_503_13
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(14931..16040)
DNA (1110bp) protein (370aa)
Membrane fusion protein mtrC n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG17_9BACT
Membrane fusion protein mtrC {ECO:0000313|EMBL:CCH52842.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
RND family efflux transporter MFP subunit
scnpilot_p_inoc_scaffold_503_14
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(16030..19227)
DNA (3198bp) protein (1066aa)
Nodulation protein nolG n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG16_9BACT
Nodulation protein nolG {ECO:0000313|EMBL:CCH52841.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
acriflavin resistance protein
scnpilot_p_inoc_scaffold_503_15
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(19240..20619)
DNA (1380bp) protein (460aa)
Outer membrane efflux protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG15_9BACT
Outer membrane efflux protein {ECO:0000313|EMBL:CCH52840.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
outer membrane efflux protein
scnpilot_p_inoc_scaffold_503_16
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(20626..21033)
DNA (408bp) protein (136aa)
Two-component system, unclassified family, response regulator n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG14_9BACT
Two-component system, unclassified family, response regulator {ECO:0000313|EMBL:CCH52839.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" sourc
response regulator receiver protein
scnpilot_p_inoc_scaffold_503_17
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21180..21857
DNA (678bp) protein (226aa)
Transcriptional regulatory protein cusR n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG13_9BACT
Transcriptional regulatory protein cusR {ECO:0000313|EMBL:CCH52838.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ
transcriptional regulator
scnpilot_p_inoc_scaffold_503_18
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

21854..23227
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" so
Histidine kinase n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GG12_9BACT
histidine kinase
scnpilot_p_inoc_scaffold_503_19
unknown

Not on your lists

23378..23647
DNA (270bp) protein (90aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_503_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(23702..24436)
DNA (735bp) protein (245aa)
Two component transcriptional regulator, LytTR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W252_DYAFD
LytTR family two component transcriptional regulator
Two component transcriptional regulator, LytTR family {ECO:0000313|EMBL:ACT92025.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyad
scnpilot_p_inoc_scaffold_503_21
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(24433..25458)
DNA (1026bp) protein (342aa)
Signal transduction histidine kinase, LytS n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W251_DYAFD
signal transduction histidine kinase LytS
Signal transduction histidine kinase, LytS {ECO:0000313|EMBL:ACT92024.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_503_22
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

25700..26077
DNA (378bp) protein (126aa)
Putative uncharacterized protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W250_DYAFD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92023.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_503_23
Chitinophaga pinensis, Chitinophaga, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

26085..27023
DNA (939bp) protein (313aa)
Beta-lactamase n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7PJ16_CHIPD
beta-lactamase
Beta-lactamase {ECO:0000313|EMBL:ACU60100.1}; TaxID=485918 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Chitinophaga.;" source="Chitinophaga pinensis (stra
scnpilot_p_inoc_scaffold_503_24
Pedobacter glucosidilyticus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

27274..27927
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000374F866 rbh
Global nitrogen regulator {ECO:0000313|EMBL:KHJ38734.1}; TaxID=1122941 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter glu
Crp/Fnr family transcriptional regulator
scnpilot_p_inoc_scaffold_503_25
Galbibacter marinus, Galbibacter, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

28212..29633
DNA (1422bp) protein (474aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2QH97_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKF54117.1}; TaxID=555500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Galbibacter.;" source="Galbibacter marinus.;"
hypothetical protein
scnpilot_p_inoc_scaffold_503_26
Schleiferia thermophila, Schleiferia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29671..29976
DNA (306bp) protein (102aa)
Rhodanese-like domain-containing protein n=1 Tax=Flavobacterium limnosediminis JC2902 RepID=V6SRK6_9FLAO
Sulfurtransferase {ECO:0000313|EMBL:KFD40061.1}; TaxID=1453500 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Schleiferiaceae; Schleiferia.;" source="Schleiferia thermophila str.
Rhodanese-like domain-containing protein
scnpilot_p_inoc_scaffold_503_27
Chryseobacterium sp. JM1, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

29993..30556
DNA (564bp) protein (188aa)
YeeE/YedE family protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000366EFF0 rbh
Transmembrane protein {ECO:0000313|EMBL:KFF20891.1}; TaxID=1233950 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseobacterium s
hypothetical protein
scnpilot_p_inoc_scaffold_503_28
Chryseobacterium taiwanense, Chryseobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

30621..31181
DNA (561bp) protein (187aa)
Methyltransferase family protein n=1 Tax=Joostella marina DSM 19592 RepID=I3C1Y3_9FLAO
SAM-dependent methyltransferase {ECO:0000313|EMBL:KIC64258.1}; TaxID=363331 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Chryseobacterium.;" source="Chryseoba
type 11 methyltransferase
scnpilot_p_inoc_scaffold_503_29
Flavihumibacter petaseus, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

31182..31691
DNA (510bp) protein (170aa)
Putative uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X6I9_FLAB3
Uncharacterized protein {ECO:0000313|EMBL:GAO44022.1}; TaxID=1220578 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacte
hypothetical protein
scnpilot_p_inoc_scaffold_503_30
Rhodonellum psychrophilum, Rhodonellum, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

32829..33236
DNA (408bp) protein (136aa)
FAD-dependent pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Rhodonellum psychrophilum GCM71 = DSM 17998 RepID=U5BZW0_9BACT
FAD-dependent pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:ERM83348.1}; TaxID=1123057 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Rhodonellum.;" source
NAD(FAD)-dependent dehydrogenase
Displaying items 1-30 of 67 in total

View Taxonomy