ggKbase home page

scnpilot_p_inoc_scaffold_1415

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1415_1
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(16..846)
DNA (831bp) protein (277aa)
3-oxoacyl-(Acyl-carrier-protein) reductase {ECO:0000313|EMBL:AEW00537.1}; EC=1.1.1.100 {ECO:0000313|EMBL:AEW00537.1};; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacterial
3-oxoacyl-(Acyl-carrier-protein) reductase n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFT8_NIAKG rbh
3-oxoacyl-(acyl-carrier-protein) reductase
scnpilot_p_inoc_scaffold_1415_2
Niastella koreensis, Niastella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(865..1860)
DNA (996bp) protein (332aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Niastella koreensis (strain DSM 17620 / KACC 11465 / GR20-10) RepID=G8TFT9_NIAKG rbh
short-chain dehydrogenase/reductase SDR rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:AEW00538.1}; TaxID=700598 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niastella.;" source="Niast
scnpilot_p_inoc_scaffold_1415_3
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(2149..2703)
DNA (555bp) protein (185aa)
antirestriction protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035EAC2A
Antirestriction ArdA family protein
Antirestriction ArdA family protein {ECO:0000313|EMBL:ACT92138.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans
scnpilot_p_inoc_scaffold_1415_4
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(3088..3717)
DNA (630bp) protein (210aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003787D03
Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74833.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=
TetR family transcriptional regulator
scnpilot_p_inoc_scaffold_1415_5
Flavobacterium beibuense, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

3899..5101
DNA (1203bp) protein (401aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035CA0D0
Uncharacterized protein {ECO:0000313|EMBL:KGO80800.1}; TaxID=1406840 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacterium bei
hypothetical protein
scnpilot_p_inoc_scaffold_1415_6
unknown

Not on your lists

5113..5673
DNA (561bp) protein (187aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003788B73
scnpilot_p_inoc_scaffold_1415_7
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5844..6299
DNA (456bp) protein (152aa)
Putative uncharacterized protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXP6_LEAB4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADQ18110.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterel
scnpilot_p_inoc_scaffold_1415_8
unknown

Not on your lists

6471..6773
DNA (303bp) protein (101aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1415_9
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(6830..8197)
DNA (1368bp) protein (456aa)
Tetratricopeptide domain protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXP4_LEAB4 rbh
hypothetical protein
Tetratricopeptide domain protein {ECO:0000313|EMBL:ADQ18108.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Lea
scnpilot_p_inoc_scaffold_1415_10
Sphingobacterium sp. 21, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8209..11415)
DNA (3207bp) protein (1069aa)
TonB-dependent receptor plug n=1 Tax=Sphingobacterium sp. (strain 21) RepID=F4CEI5_SPHS2 rbh
TonB-dependent receptor plug
TonB-dependent receptor plug {ECO:0000313|EMBL:ADZ76680.1}; TaxID=743722 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphing
scnpilot_p_inoc_scaffold_1415_11
Leadbetterella byssophila, Leadbetterella, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

comp(11437..12798)
DNA (1362bp) protein (454aa)
Redoxin domain protein n=1 Tax=Leadbetterella byssophila (strain DSM 17132 / KACC 11308 / 4M15) RepID=E4RXP2_LEAB4 rbh
redoxin domain-containing protein rbh
Redoxin domain protein {ECO:0000313|EMBL:ADQ18106.1}; Flags: Precursor;; TaxID=649349 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Leadbetterella.;" source="Leadbetterell
scnpilot_p_inoc_scaffold_1415_12
Niabella soli, Niabella, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13330..13569
DNA (240bp) protein (80aa)
hypothetical protein n=1 Tax=Niabella aurantiaca RepID=UPI00037BA81C
XRE family transcriptional regulator
XRE family transcriptional regulator {ECO:0000313|EMBL:AHF14121.1}; TaxID=929713 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Niabella.;" source="Niabella
scnpilot_p_inoc_scaffold_1415_13
Pedobacter heparinus, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(13704..13970)
DNA (267bp) protein (89aa)
Putative uncharacterized protein n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y421_PEDHD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACU05464.1}; TaxID=485917 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter hepari
scnpilot_p_inoc_scaffold_1415_14
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14880..15314
DNA (435bp) protein (145aa)
hypothetical protein n=1 Tax=Spirosoma spitsbergense RepID=UPI000361B92F
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKA90979.1}; TaxID=1073386 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis HMW 610.;
scnpilot_p_inoc_scaffold_1415_15
unknown

Not on your lists

comp(15401..15526)
DNA (126bp) protein (42aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1415_16
Pedobacter sp. NL19, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(15531..16796)
DNA (1266bp) protein (422aa)
7-keto-8-aminopelargonate synthetase-like enzyme n=1 Tax=Chryseobacterium sp. CF314 RepID=J2JP50_9FLAO rbh
Contig132, whole genome shotgun sequence {ECO:0000313|EMBL:KIO74836.1}; TaxID=1503925 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source=
putative glycine C-acetyltransferase
scnpilot_p_inoc_scaffold_1415_17
unknown

Not on your lists

comp(17159..17302)
DNA (144bp) protein (48aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_1415_18
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17318..17842
DNA (525bp) protein (175aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037D6416
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92186.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_1415_19
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

17944..18267
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00035EE1E4
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92187.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fer
scnpilot_p_inoc_scaffold_1415_20
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

18710..19042
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00037A85B0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92188.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_1415_21
Flavobacterium sp. AED, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

19079..21091
DNA (2013bp) protein (671aa)
Bacteroides conjugative transposon TraG-like protein n=1 Tax=Flavobacterium johnsoniae (strain ATCC 17061 / DSM 2064 / UW101) RepID=A5FE11_FLAJ1
Conjugal transfer protein TraG {ECO:0000313|EMBL:KIA82441.1}; TaxID=1423323 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacter
Type IV secretory pathway VirB4 components-like protein
Displaying 21 items

View Taxonomy