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scnpilot_p_inoc_scaffold_1862

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_1862_1
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(256..1095)
DNA (840bp) protein (280aa)
AraC family transcriptional regulator n=1 Tax=Dyadobacter beijingensis RepID=UPI00037C1E1E rbh
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ACT92128.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
scnpilot_p_inoc_scaffold_1862_2
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(1190..2095)
DNA (906bp) protein (302aa)
alpha/beta hydrolase n=1 Tax=Dyadobacter beijingensis RepID=UPI00036FEDF9 rbh
alpha/beta hydrolase fold protein
Alpha/beta hydrolase fold protein {ECO:0000313|EMBL:ACT92129.1}; Flags: Precursor;; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyado
scnpilot_p_inoc_scaffold_1862_3
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(2777..3169)
DNA (393bp) protein (131aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003628716
Putative secreted protein {ECO:0000313|EMBL:CCH53466.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
scnpilot_p_inoc_scaffold_1862_4
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3259..3582)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI000363A0FD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACT92132.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain ATC
scnpilot_p_inoc_scaffold_1862_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(3663..4448)
DNA (786bp) protein (262aa)
Short-chain dehydrogenase/reductase SDR n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W329_DYAFD rbh
short chain dehydrogenase rbh
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ACT92133.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermen
scnpilot_p_inoc_scaffold_1862_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4596..4940
DNA (345bp) protein (115aa)
Transcriptional regulator, HxlR family n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W330_DYAFD
HxlR family transcriptional regulator
Transcriptional regulator, HxlR family {ECO:0000313|EMBL:ACT92134.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
scnpilot_p_inoc_scaffold_1862_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(4912..5214)
DNA (303bp) protein (101aa)
condensation protein n=1 Tax=Dyadobacter beijingensis RepID=UPI0003705356
condensation domain-containing protein
Condensation domain-containing protein {ECO:0000313|EMBL:ACT92135.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter ferment
scnpilot_p_inoc_scaffold_1862_8
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(6068..8719)
DNA (2652bp) protein (884aa)
hypothetical protein n=1 Tax=Dyadobacter beijingensis RepID=UPI00036FC3A5 rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB38203.1}; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (strain ATCC 3390
scnpilot_p_inoc_scaffold_1862_9
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(8722..9054)
DNA (333bp) protein (111aa)
Transcriptional regulator, PadR-like family n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GMR6_9BACT
Transcriptional regulator, PadR-like family {ECO:0000313|EMBL:CCH55194.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi
PadR family transcriptional regulator
scnpilot_p_inoc_scaffold_1862_10
Sphingobacterium spiritivorum, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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10259..11365
DNA (1107bp) protein (369aa)
Pyridine nucleotide-disulfide oxidoreductase n=1 Tax=Sphingobacterium spiritivorum ATCC 33300 RepID=C2G3N4_9SPHI
Pyridine nucleotide-disulfide oxidoreductase {ECO:0000313|EMBL:EEI90239.1}; TaxID=525372 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;
flavin-binding monooxygenase-like protein pyridine nucleotide-disulfide oxidoreductase
scnpilot_p_inoc_scaffold_1862_11
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

11392..12006
DNA (615bp) protein (205aa)
RNA polymerase sigma-70 factor n=1 Tax=Pedobacter heparinus (strain ATCC 13125 / DSM 2366 / NCIB 9290) RepID=C6Y0D6_PEDHD
Uncharacterized protein {ECO:0000313|EMBL:ETZ22749.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
RNA polymerase sigma-70 factor
scnpilot_p_inoc_scaffold_1862_12
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

12144..13136
DNA (993bp) protein (331aa)
Anti-FecI sigma factor, FecR n=1 Tax=Mucilaginibacter paludis DSM 18603 RepID=H1YE35_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ22750.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
anti-FecI sigma factor FecR
scnpilot_p_inoc_scaffold_1862_13
Pedobacter sp. V48, Pedobacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists

13200..15821
DNA (2622bp) protein (874aa)
TonB-dependent receptor n=1 Tax=Niabella soli DSM 19437 RepID=H1NN17_9SPHI
Uncharacterized protein {ECO:0000313|EMBL:ETZ22313.1}; TaxID=509635 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Pedobacter.;" source="Pedobacter sp. V4
TonB-denpendent receptor
Displaying 13 items

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