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scnpilot_p_inoc_scaffold_2469

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
scnpilot_p_inoc_scaffold_2469_1
Desulfosporosinus acidiphilus, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(101..613)
DNA (513bp) protein (171aa)
site-specific recombinase XerD n=1 Tax=Marinilabilia salmonicolor RepID=UPI000299FDA5
site-specific recombinase XerD
Site-specific recombinase XerD {ECO:0000313|EMBL:AFM41530.1}; TaxID=646529 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus acid
scnpilot_p_inoc_scaffold_2469_2
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(606..1898)
DNA (1293bp) protein (431aa)
phage integrase n=1 Tax=Marinilabilia salmonicolor RepID=UPI00029A3D0C rbh
Uncharacterized protein {ECO:0000313|EMBL:EOS12252.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV
site-specific recombinase XerD
scnpilot_p_inoc_scaffold_2469_3
GWF2_Bacteroidetes_43_63_curated, Bacteroidetes, Bacteria

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2003..2827
DNA (825bp) protein (275aa)
Integrase catalytic region id=2053980 bin=GWE2_Bacteroidetes_42_42 species=Chlorobium limicola genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=GWE2_Bacteroidetes_42_42 organism_group=Bacteroidetes organism_desc=Good +
integrase catalytic subunit Tax=GWF2_Bacteroidetes_43_63_curated
integrase catalytic subunit
scnpilot_p_inoc_scaffold_2469_4
Flavihumibacter sp. ZG627, Flavihumibacter, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

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2855..3586
DNA (732bp) protein (244aa)
IstB domain protein ATP-binding protein n=1 Tax=Chitinophaga pinensis (strain ATCC 43595 / DSM 2588 / NCIB 11800 / UQM 2034) RepID=C7P9X0_CHIPD
ATP-binding protein {ECO:0000313|EMBL:KIC89042.1}; TaxID=1463156 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Chitinophagaceae; Flavihumibacter.;" source="Flavihumibacter sp
IstB domain-containing protein ATP-binding protein
scnpilot_p_inoc_scaffold_2469_5
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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3698..4069
DNA (372bp) protein (124aa)
Integrase family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3B9_DYAFD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACT92223.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain AT
scnpilot_p_inoc_scaffold_2469_6
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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4145..4387
DNA (243bp) protein (81aa)
Transposase IS3/IS911 family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VUY0_DYAFD
transposase IS3/IS911 family protein
Transposase IS3/IS911 family protein {ECO:0000313|EMBL:ACT93117.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentan
scnpilot_p_inoc_scaffold_2469_7
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

4564..5268
DNA (705bp) protein (235aa)
Integrase catalytic region n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W2F3_DYAFD rbh
Integrase catalytic subunit rbh
Integrase catalytic region {ECO:0000313|EMBL:ACT92126.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain
scnpilot_p_inoc_scaffold_2469_8
Dyadobacter fermentans, Dyadobacter, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

5416..5784
DNA (369bp) protein (123aa)
Integrase family protein n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6W3B9_DYAFD
integrase family protein
Integrase family protein {ECO:0000313|EMBL:ACT92223.1}; TaxID=471854 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Dyadobacter.;" source="Dyadobacter fermentans (strain AT
scnpilot_p_inoc_scaffold_2469_9
CG_Delta_05, Deltaproteobacteria, Proteobacteria, Bacteria

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6071..6970
DNA (900bp) protein (300aa)
Putative uncharacterized protein n=1 Tax=Saccharophagus degradans (strain 2-40 / ATCC 43961 / DSM 17024) RepID=Q21JP8_SACD2
response regulator receiver domain-containing protein Tax=CG_Delta_05
hypothetical protein
scnpilot_p_inoc_scaffold_2469_10
unknown

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7000..7434
DNA (435bp) protein (145aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2469_11
Calothrix parietina, Calothrix, Nostocales, Cyanobacteria, Bacteria

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comp(7642..8388)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BER6_CLOPF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ02712.1}; Flags: Precursor;; TaxID=1170562 species="Bacteria; Cyanobacteria; Nostocales; Rivulariaceae; Calothrix.;" source="Calothrix sp. PCC 6303.;"
scnpilot_p_inoc_scaffold_2469_12
unknown

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comp(8799..9227)
DNA (429bp) protein (143aa)

This feature has no annotations

scnpilot_p_inoc_scaffold_2469_13
Spirosoma linguale, Spirosoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(9206..12457)
DNA (3252bp) protein (1084aa)
YD repeat protein n=1 Tax=Spirosoma linguale (strain ATCC 33905 / DSM 74 / LMG 10896) RepID=D2QDM7_SPILD
hypothetical protein
YD repeat protein {ECO:0000313|EMBL:ADB38157.1}; Flags: Precursor;; TaxID=504472 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Spirosoma.;" source="Spirosoma linguale (str
scnpilot_p_inoc_scaffold_2469_14
Fibrisoma limi, Fibrisoma, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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comp(12472..13062)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GKX9_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCH54555.1}; TaxID=1185876 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Cytophagaceae; Fibrisoma.;" source="Fibrisoma limi BUZ 3.;"
hypothetical protein
Displaying 14 items

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