ggKbase home page

scnpilot_p_inoc_scaffold_3_64

Organism: SCNpilot_P_inoc_Dyadobacter_48_40

near complete RP 51 / 55 MC: 1 BSCG 49 / 51 ASCG 14 / 38 MC: 1
Location: 66034..67836

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=471854 specie similarity UNIPROT
DB: UniProtKB
  • Identity: 91.4
  • Coverage: 606.0
  • Bit_score: 1073
  • Evalue 0.0
Transcription termination factor Rho n=1 Tax=Dyadobacter fermentans (strain ATCC 700827 / DSM 18053 / NS114) RepID=C6VSG5_DYAFD similarity UNIREF
DB: UNIREF100
  • Identity: 91.4
  • Coverage: 606.0
  • Bit_score: 1073
  • Evalue 0.0
  • rbh
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 91.4
  • Coverage: 606.0
  • Bit_score: 1073
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Dyadobacter fermentans → Dyadobacter → Cytophagales → Cytophagia → Bacteroidetes → Bacteria

Sequences

DNA sequence
Length: 1803
ATGCCTACAATTGATGATTTAAACATTAAGCTTTTATCAGAGCTACGAGAAATAGCGGGTGCTCTGGGAATACCCGATCATACCAAACTTCCTAAAAAAGAACTGATTAACCGGATCGTGTCGCAGCAGCAAGCACCTGCCCCTGTTGCCACACCCGCTGCTGTGGAAGCTCCCGAACTGGAAGCCGTTACCACTGATTCCGGAGAACCCAAGAAAAAACGCACCAGAAGGCCCATTGAGCCTACTCCCGTGCCTGTGAAAGGCGGAAATAACCGTCCCGCACGGAACAAAAAAGATAGCAATTCACCAATCCCTTCCGCGGCGCCATTATTCGATACTCTTGCCCGTCAGGAGTTTCCGAAACGCCAGGAAGAACGTCCGAAAAATATAGATACATCGCTGGAAATCGACGAGGACAATGACACACTCAACGATCTGGGCAGAGAAGAAATCCCGGCGGCAGCGGAAGTAACAACCGAGCCGGAGGTATCAGCCCCGGAAATCCAGGCTGACGACCAGGAAGAGAAACCTGCGGAAGTATCCCATGAAGCGGCACCCCAGCCACGTGAGGAACGCCAGCAGCGCCCCCAGCAAGAAGGCCAGGAAAGGCATCAGCAGCCTCAGGCACAGCGTGAGGATCCATCTTCGAAAATCAAACGCAACTACAACAACTACGTAAGAGAGTTTGATGGTCTGATTGTCAATGAAGGTGTATTGGAAATCATGCAGGATGGCGGCTACGGCTTCCTTCGCTCGGCGGATTACAACTACCTGGCAAGCCCAGATGACATTTACGTGTCGCCTTCGCAAATCAAACTGTTCGGCTTGAAAACCGGTGACACCGTAAAAGGTCAGATCCGCCCGCCGAAAGAAGGAGAAAAATACTTTGCATTGCTGCGCGTGGAAACGGTTAATGGCAAAACCACCGAAGAAATCCGCGACCGTATCCCGTTTGAATACCTTACCCCATTGTTCCCCGATGAATGCCTGCGTCTGAGCTCGCGCCCGGAACAATATTCTACCCGTATTCTCGATCTCTTTGCACCCATCGGAAAAGGCCAGCGCGGTATGATCGTAGCACAGCCTAAAACCGGTAAAACCGTGCTTTTGAAAGAAATCGCGAATGCCATTACCCGCAACCACCCCGAAGTGTTCCTGCTGATCCTGCTGATCGACGAACGCCCGGAAGAAGTTACGGATATGCAGCGCAGCGTGCGTGCGGAGGTTATCGCCTCTACATTTGACGAGCAAGCCGACCGCCACGTGAAAGTAGCGAGCATTGTTTTGGAGAAAGCCAAAAGAATGGTGGAATGCGGTCACGACGTGGTGATTCTGCTCGATTCGATCACGCGTCTGGCCCGTGCGTATAACACGGTAGTTCCTTCTTCCGGTAAGATCCTTTCCGGTGGTGTGGATGCCAATGCATTGCACAAGCCGAAACGCTTCTTCGGTGCGGCACGTAATGTGGAAAACGGCGGCTCGCTGACCATTATCGCAACCGCATTGATCGATACCGGTTCTAAAATGGACGAAGTAATCTTCGAAGAATTCAAAGGTACCGGTAATATGGAATTGCAACTCGACCGCAAGCTGTCCAACAAACGCGTATTCCCGGCTATCGATGTAATGGCTTCCGGTACCCGCCGCGAGGATTTGCTGCTCGACAAGGAAACGCTCAAAAAAGTATGGATCCTCCGCAAGCACATGTCCGACATGAATGCGATGGAATCGATGGACTTCCTTTTGGAACATATGAAAGGGACACGGAACAACGAAGAGTTCCTGATCTCGATGAACCGATAA
PROTEIN sequence
Length: 601
MPTIDDLNIKLLSELREIAGALGIPDHTKLPKKELINRIVSQQQAPAPVATPAAVEAPELEAVTTDSGEPKKKRTRRPIEPTPVPVKGGNNRPARNKKDSNSPIPSAAPLFDTLARQEFPKRQEERPKNIDTSLEIDEDNDTLNDLGREEIPAAAEVTTEPEVSAPEIQADDQEEKPAEVSHEAAPQPREERQQRPQQEGQERHQQPQAQREDPSSKIKRNYNNYVREFDGLIVNEGVLEIMQDGGYGFLRSADYNYLASPDDIYVSPSQIKLFGLKTGDTVKGQIRPPKEGEKYFALLRVETVNGKTTEEIRDRIPFEYLTPLFPDECLRLSSRPEQYSTRILDLFAPIGKGQRGMIVAQPKTGKTVLLKEIANAITRNHPEVFLLILLIDERPEEVTDMQRSVRAEVIASTFDEQADRHVKVASIVLEKAKRMVECGHDVVILLDSITRLARAYNTVVPSSGKILSGGVDANALHKPKRFFGAARNVENGGSLTIIATALIDTGSKMDEVIFEEFKGTGNMELQLDRKLSNKRVFPAIDVMASGTRREDLLLDKETLKKVWILRKHMSDMNAMESMDFLLEHMKGTRNNEEFLISMNR*